Difference between revisions of "ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] == * direction: ** REVERSIBLE * common name: ** hydroxyacyl-coenzyme_a_dehydro...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] == * direction:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2044 RXN0-2044] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
** acetylornithine_aminotransferase
−
** 3-hydroxyacyl-_dehydrogenase
+
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** [http://enzyme.expasy.org/EC/2.6.1.44 EC-2.6.1.44]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-HYDROXYADIPYL-COA]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-KETO-ADIPYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[GLYOX]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (3S)-hydroxyadipyl-CoA[c] '''+''' 1 NAD+[c] '''<=>''' 1 3-oxoadipyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 glyoxylate[c] '''+''' 1 L-alanine[c] '''<=>''' 1 glycine[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14026]]
+
* Gene: [[Tiso_gene_6134]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_5726]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_11231]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_18838]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_14027]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
+
* [[GLYSYN-ALA-PWY]], glycine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-ALA-PWY GLYSYN-ALA-PWY]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
+
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[experimental_annotation]]
+
* Category: [[manual]]
−
*** [[in-silico_annotation]]
+
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34851 34851]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R06941 R06941]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P31029 P31029]
 +
** [http://www.uniprot.org/uniprot/P31030 P31030]
 +
** [http://www.uniprot.org/uniprot/P41689 P41689]
 +
** [http://www.uniprot.org/uniprot/Q94055 Q94055]
 +
** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5]
 +
** [http://www.uniprot.org/uniprot/P21549 P21549]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: common name=acetylornithine_aminotransferase}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: ec number=EC-2.6.1.44}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: gene associated=Tiso_gene_6134|Tiso_gene_5726|Tiso_gene_11231}}
−
{{#set: ec number=EC-1.1.1.35}}
+
{{#set: in pathway=GLYSYN-ALA-PWY}}
−
{{#set: gene associated=Tiso_gene_14026|Tiso_gene_18838|Tiso_gene_14027|Tiso_gene_18839|Tiso_gene_14262|Tiso_gene_5857}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: in pathway=PWY-1361|PWY0-321}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|manual-primary_network|orthology-esiliculosus}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:24, 21 March 2018

Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • acetylornithine_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 glyoxylate[c] + 1 L-alanine[c] <=> 1 glycine[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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