Difference between revisions of "Tiso gene 8387"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8387 == * right end position: ** 2571 * transcription direction: ** POSITIVE * left end position: ** 383 * centisome position: ** 3.719169...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN] ==
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== Gene Tiso_gene_8387 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2571
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* common name:
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* transcription direction:
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** probable_gamma_hydroxybutyrate_dehydrogenase
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** POSITIVE
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** gamma_hydroxybutyrate_dehydrogenase
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* left end position:
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* ec number:
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** 383
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** [http://enzyme.expasy.org/EC/1.1.1.61 EC-1.1.1.61]
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* centisome position:
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** 3.719169   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.142-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[4-HYDROXY-BUTYRATE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H+[c] '''+''' 1 succinate semialdehyde[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 4-hydroxybutanoate[c]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_777]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_91]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5677]], succinate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5677 PWY-5677]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2571}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23948 23948]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=383}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01644 R01644]
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{{#set: centisome position=3.719169    }}
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* UNIPROT:
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{{#set: reaction associated=2.4.1.142-RXN}}
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** [http://www.uniprot.org/uniprot/Q59104 Q59104]
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{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=probable_gamma_hydroxybutyrate_dehydrogenase}}
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{{#set: common name=gamma_hydroxybutyrate_dehydrogenase}}
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{{#set: ec number=EC-1.1.1.61}}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_91}}
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{{#set: in pathway=PWY-5022|PWY-5677}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:24, 21 March 2018

Gene Tiso_gene_8387

  • right end position:
    • 2571
  • transcription direction:
    • POSITIVE
  • left end position:
    • 383
  • centisome position:
    • 3.719169
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8387&oldid=48554"