Difference between revisions of "RXN-17428"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] == * direction: ** REVERSIBLE * ec num...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACETOACETYLCOATHIOL-RXN METHYLACETOACETYLCOATHIOL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17428 RXN-17428] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** geranylgeranyl_diphosphate_reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.9 EC-2.3.1.9]
+
** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[2-METHYL-ACETO-ACETYL-COA]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
+
** 1 [[CPD-7005]][c] '''+''' 3 [[PROTON]][c] '''+''' 3 [[NADPH]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[CHLOROPHYLL-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 2-methylacetoacetyl-CoA[c] '''<=>''' 1 acetyl-CoA[c] '''+''' 1 propanoyl-CoA[c]
+
** 1 geranylgeranyl chlorophyll a[c] '''+''' 3 H+[c] '''+''' 3 NADPH[c] '''=>''' 3 NADP+[c] '''+''' 1 chlorophyll a[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17451]]
+
* Gene: [[Tiso_gene_2613]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_16181]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_15327]]
+
** Source: [[orthology-creinhardtii]]
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
*** [[athaliana]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30721 30721]
+
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-1.3.1.83}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00927 R00927]
+
{{#set: gene associated=Tiso_gene_2613}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=}}
−
{{#set: ec number=EC-2.3.1.9}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_16181|Tiso_gene_15327}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-creinhardtii|annotation-in-silico_annotation}}
−
{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+

Latest revision as of 21:24, 21 March 2018

Reaction RXN-17428

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 geranylgeranyl chlorophyll a[c] + 3 H+[c] + 3 NADPH[c] => 3 NADP+[c] + 1 chlorophyll a[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17428&oldid=48559"