Difference between revisions of "SAMDECARB-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_2320 == * left end position: ** 4629 * transcription direction: ** POSITIVE * right end position: ** 4897 * centisome position: ** 16.49620...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** s-adenosylmethionin...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_2320 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] ==
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* left end position:
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* direction:
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** 4629
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** s-adenosylmethionine_decarboxylase_proenzyme
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* right end position:
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* ec number:
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** 4897
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** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50]
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* centisome position:
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** 16.496204   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 H+[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_4269]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_11030]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4629}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
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{{#set: right end position=4897}}
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* LIGAND-RXN:
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{{#set: centisome position=16.496204    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
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{{#set: reaction associated=RNA-DIRECTED-DNA-POLYMERASE-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P82184 P82184]
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** [http://www.uniprot.org/uniprot/P21182 P21182]
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** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
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** [http://www.uniprot.org/uniprot/P17707 P17707]
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** [http://www.uniprot.org/uniprot/P28918 P28918]
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** [http://www.uniprot.org/uniprot/P17708 P17708]
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** [http://www.uniprot.org/uniprot/P50243 P50243]
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** [http://www.uniprot.org/uniprot/P46255 P46255]
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** [http://www.uniprot.org/uniprot/Q04694 Q04694]
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** [http://www.uniprot.org/uniprot/Q42679 Q42679]
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** [http://www.uniprot.org/uniprot/Q42829 Q42829]
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** [http://www.uniprot.org/uniprot/P79888 P79888]
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** [http://www.uniprot.org/uniprot/O04009 O04009]
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** [http://www.uniprot.org/uniprot/O24575 O24575]
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** [http://www.uniprot.org/uniprot/Q43820 Q43820]
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** [http://www.uniprot.org/uniprot/Q39676 Q39676]
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** [http://www.uniprot.org/uniprot/Q39677 Q39677]
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** [http://www.uniprot.org/uniprot/O49972 O49972]
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** [http://www.uniprot.org/uniprot/O65354 O65354]
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** [http://www.uniprot.org/uniprot/O02655 O02655]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=s-adenosylmethionine_decarboxylase_proenzyme}}
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{{#set: ec number=EC-4.1.1.50}}
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{{#set: gene associated=Tiso_gene_4269|Tiso_gene_11030}}
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{{#set: in pathway=ARGSPECAT-PWY|BSUBPOLYAMSYN-PWY|PWY-6834}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:25, 21 March 2018

Reaction SAMDECARB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • s-adenosylmethionine_decarboxylase_proenzyme
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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