Difference between revisions of "PWY-6922"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** methylenetetrahydrofo...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.20-RXN 1.5.1.20-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** methylenetetrahydrofolate_reductase
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** L-Nδ-acetylornithine biosynthesis
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** -methylenetetrahydrofolate_reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.5.1.20 EC-1.5.1.20]
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* Synonym(s):
 
* Synonym(s):
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** L-N-delta-acetylornithine biosynthesis
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** Nδ-acetyl-L-ornithine biosynthesis
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** L-N5-acetylornithine biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''7''' reactions in the full pathway
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** 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[5-METHYL-THF-GLU-N]][c]
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* [[ARGINASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 an N5-methyl-tetrahydrofolate[c]
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*** [[Tiso_gene_4415]]
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** 4 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-athaliana]]
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* [[Tiso_gene_16954]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[GLUTKIN-RXN]]
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* [[Tiso_gene_14582]]
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** 3 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_12021]]
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***EC-NUMBER
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*** [[Tiso_gene_16634]]
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** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_17057]]
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***EC-NUMBER
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** 7 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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*** [[orthology-esiliculosus]]
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* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
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*** [[annotation-in-silico_annotation]]
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** '''7''' reactions found over '''12''' reactions in the full pathway
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*** [[orthology-athaliana]]
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* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
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*** [[orthology-synechocystis]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
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*** [[orthology-creinhardtii]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[GLUTSEMIALDEHYDROG-RXN]]
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* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
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** 2 associated gene(s):
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** '''9''' reactions found over '''11''' reactions in the full pathway
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*** [[Tiso_gene_16634]]
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== Reconstruction information  ==
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*** [[Tiso_gene_16258]]
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* [[orthology]]:
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** 6 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[orthology-esiliculosus]]
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*** [[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* [[manual]]:
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*** [[orthology-athaliana]]
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** [[primary_network]]
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*** [[orthology-synechocystis]]
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* [[annotation]]:
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*** [[manual-primary_network]]
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** [[pathwaytools]]:
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*** [[orthology-creinhardtii]]
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*** [[experimental_annotation]]
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* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
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*** [[in-silico_annotation]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11231]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-synechocystis]]
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* [[RXN-14903]]
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** 3 associated gene(s):
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*** [[Tiso_gene_18826]]
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*** [[Tiso_gene_18825]]
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*** [[Tiso_gene_9762]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[SPONTPRO-RXN]]
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** 0 associated gene:
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12667 RXN-12667]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PLANTCYC : PWY-6922
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** [http://www.genome.jp/dbget-bin/www_bget?R07168 R07168]
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* ARACYC:
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* UNIPROT:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-6922 PWY-6922]
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** [http://www.uniprot.org/uniprot/Q9PN93 Q9PN93]
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/Q9JUT7 Q9JUT7]
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.uniprot.org/uniprot/P45208 P45208]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/P0AEZ1 P0AEZ1]
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{{#set: common name=L-Nδ-acetylornithine biosynthesis}}
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** [http://www.uniprot.org/uniprot/P11003 P11003]
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{{#set: common name=L-N-delta-acetylornithine biosynthesis|Nδ-acetyl-L-ornithine biosynthesis|L-N5-acetylornithine biosynthesis}}
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** [http://www.uniprot.org/uniprot/P46151 P46151]
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{{#set: reaction found=6}}
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** [http://www.uniprot.org/uniprot/P53128 P53128]
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{{#set: total reaction=7}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=86.0}}
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{{#set: common name=methylenetetrahydrofolate_reductase}}
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{{#set: common name=-methylenetetrahydrofolate_reductase}}
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{{#set: ec number=EC-1.5.1.20}}
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{{#set: gene associated=Tiso_gene_16954|Tiso_gene_14582}}
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{{#set: in pathway=PWY-2201|1CMET2-PWY|CODH-PWY|PWY-3841}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:12, 21 March 2018

Pathway PWY-6922

  • taxonomic range:
  • common name:
    • L-Nδ-acetylornithine biosynthesis
  • Synonym(s):
    • L-N-delta-acetylornithine biosynthesis
    • Nδ-acetyl-L-ornithine biosynthesis
    • L-N5-acetylornithine biosynthesis

Reaction(s) found

6 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6922&oldid=40202"