Difference between revisions of "2.4.2.31-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expas...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.2.31-RXN 2.4.2.31-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** vacuolar_protein_...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.2.31-RXN 2.4.2.31-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** ORF
 +
** vacuolar_protein_8
 +
** ankyrin_repeat_domain_protein
 +
** sir2-family_protein_hdac1
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.19 EC-2.6.1.19]
+
** [http://enzyme.expasy.org/EC/2.4.2.31 EC-2.4.2.31]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[4-AMINO-BUTYRATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[Protein-L-Arginines]][c] '''<=>''' 1 [[NIACINAMIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-557]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-aminobutanoate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 succinate semialdehyde[c] '''+''' 1 L-glutamate[c]
+
** 1 NAD+[c] '''+''' 1 a [protein]-L-arginine[c] '''<=>''' 1 nicotinamide[c] '''+''' 1 H+[c] '''+''' 1 a protein-N&omega;-(ADP-D-ribosyl)-L-arginine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11231]]
+
* Gene: [[Tiso_gene_18843]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13548]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17880]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16539]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14179]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16690]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16538]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5361]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_19256]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16775]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_19047]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18844]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_1416]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_1521]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8768]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17938]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
 
−
** '''2''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-5022]], 4-aminobutanoate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6536]], 4-aminobutanoate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6536 PWY-6536]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23352 23352]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01648 R01648]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00555 R00555]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22256 P22256]
+
** [http://www.uniprot.org/uniprot/Q03515 Q03515]
−
** [http://www.uniprot.org/uniprot/P50457 P50457]
+
** [http://www.uniprot.org/uniprot/P55806 P55806]
−
** [http://www.uniprot.org/uniprot/Q9UZ71 Q9UZ71]
+
** [http://www.uniprot.org/uniprot/P52961 P52961]
−
** [http://www.uniprot.org/uniprot/P50554 P50554]
+
** [http://www.uniprot.org/uniprot/P55807 P55807]
−
** [http://www.uniprot.org/uniprot/P80404 P80404]
+
** [http://www.uniprot.org/uniprot/Q92080 Q92080]
−
** [http://www.uniprot.org/uniprot/P14010 P14010]
+
−
** [http://www.uniprot.org/uniprot/P17649 P17649]
+
−
** [http://www.uniprot.org/uniprot/P40829 P40829]
+
−
** [http://www.uniprot.org/uniprot/O13837 O13837]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.6.1.19}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_11231}}
+
{{#set: common name=vacuolar_protein_8}}
−
{{#set: in pathway=PWY-4321|GLUDEG-I-PWY|P181-PWY|PWY-5022|PWY-6537|PWY-6536|PWY-6535}}
+
{{#set: common name=ankyrin_repeat_domain_protein}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=sir2-family_protein_hdac1}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-2.4.2.31}}
−
{{#set: reconstruction source=synechocystis}}
+
{{#set: gene associated=Tiso_gene_18843|Tiso_gene_13548|Tiso_gene_17880|Tiso_gene_16539|Tiso_gene_14179|Tiso_gene_16690|Tiso_gene_16538|Tiso_gene_5361|Tiso_gene_19256|Tiso_gene_16775|Tiso_gene_19047|Tiso_gene_18844|Tiso_gene_1416|Tiso_gene_1521|Tiso_gene_8768|Tiso_gene_17938}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:26, 21 March 2018

Reaction 2.4.2.31-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • vacuolar_protein_8
    • ankyrin_repeat_domain_protein
    • sir2-family_protein_hdac1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 a [protein]-L-arginine[c] <=> 1 nicotinamide[c] + 1 H+[c] + 1 a protein-Nω-(ADP-D-ribosyl)-L-arginine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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