Difference between revisions of "RXN-17875"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosp...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONDEHYDROG-RXN 6PGLUCONDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17875 RXN-17875] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]
+
** methionine_aminopeptidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.351 EC-1.1.1.351]
+
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
 
* Synonym(s):
 
* Synonym(s):
−
** 6PGD
 
−
** 6-phosphogluconic carboxylase
 
−
** 6-phosphogluconic dehydrogenase
 
−
** Phosphogluconic acid dehydrogenase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-2961]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[L-methionyl-glycyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-glycine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-gluconate 6-phosphate[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 D-ribulose 5-phosphate[c] '''+''' 1 NAD(P)H[c] '''+''' 1 CO2[c]
+
** 1 an N-terminal-L-methionyl-glycyl-[protein][c] '''+''' 1 H2O[c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal glycyl-[protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_20238]]
+
* Gene: [[Tiso_gene_4247]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[athaliana]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_5715]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_91]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_7157]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[synechocystis]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
*** [[athaliana]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P14332 P14332]
 
−
** [http://www.uniprot.org/uniprot/P31072 P31072]
 
−
** [http://www.uniprot.org/uniprot/Q9CDN4 Q9CDN4]
 
−
** [http://www.uniprot.org/uniprot/P47506 P47506]
 
−
** [http://www.uniprot.org/uniprot/Q9JWS3 Q9JWS3]
 
−
** [http://www.uniprot.org/uniprot/P43774 P43774]
 
−
** [http://www.uniprot.org/uniprot/P12013 P12013]
 
−
** [http://www.uniprot.org/uniprot/P41576 P41576]
 
−
** [http://www.uniprot.org/uniprot/P00350 P00350]
 
−
** [http://www.uniprot.org/uniprot/P00349 P00349]
 
−
** [http://www.uniprot.org/uniprot/P52209 P52209]
 
−
** [http://www.uniprot.org/uniprot/P41581 P41581]
 
−
** [http://www.uniprot.org/uniprot/P41582 P41582]
 
−
** [http://www.uniprot.org/uniprot/Q59275 Q59275]
 
−
** [http://www.uniprot.org/uniprot/P41583 P41583]
 
−
** [http://www.uniprot.org/uniprot/Q60254 Q60254]
 
−
** [http://www.uniprot.org/uniprot/P37754 P37754]
 
−
** [http://www.uniprot.org/uniprot/Q59410 Q59410]
 
−
** [http://www.uniprot.org/uniprot/P52207 P52207]
 
−
** [http://www.uniprot.org/uniprot/P70718 P70718]
 
−
** [http://www.uniprot.org/uniprot/Q7M451 Q7M451]
 
−
** [http://www.uniprot.org/uniprot/P41572 P41572]
 
−
** [http://www.uniprot.org/uniprot/P14062 P14062]
 
−
** [http://www.uniprot.org/uniprot/P21577 P21577]
 
−
** [http://www.uniprot.org/uniprot/P38720 P38720]
 
−
** [http://www.uniprot.org/uniprot/Q40311 Q40311]
 
−
** [http://www.uniprot.org/uniprot/P53319 P53319]
 
−
** [http://www.uniprot.org/uniprot/O81237 O81237]
 
−
** [http://www.uniprot.org/uniprot/O81238 O81238]
 
−
** [http://www.uniprot.org/uniprot/O81239 O81239]
 
−
** [http://www.uniprot.org/uniprot/O22111 O22111]
 
−
** [http://www.uniprot.org/uniprot/Q17761 Q17761]
 
−
** [http://www.uniprot.org/uniprot/O32911 O32911]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phosphogluconate dehydrogenase [NAD(P)+-dependent, decarboxylating]}}
+
{{#set: common name=methionine_aminopeptidase}}
−
{{#set: ec number=EC-1.1.1.351}}
+
{{#set: ec number=EC-3.4.11.18}}
−
{{#set: common name=6PGD|6-phosphogluconic carboxylase|6-phosphogluconic dehydrogenase|Phosphogluconic acid dehydrogenase}}
+
{{#set: gene associated=Tiso_gene_4247|Tiso_gene_5715}}
−
{{#set: gene associated=Tiso_gene_20238|Tiso_gene_91|Tiso_gene_7157}}
+
{{#set: in pathway=PWY-7800}}
−
{{#set: in pathway=P122-PWY}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+

Latest revision as of 20:26, 21 March 2018

Reaction RXN-17875

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionine_aminopeptidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7800, Ac/N-end rule pathway: PWY-7800
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17875&oldid=48717"