Difference between revisions of "Category:Pathway"

Latest revision as of 20:26, 21 March 2018

	Common name	Reaction found	Total reaction	Completion rate
1CMET2-PWY	N10-formyl-tetrahydrofolate biosynthesis N10-formyl-THF biosynthesis	7	9	78.0
2PHENDEG-PWY	Phenylethylamine degradation I	2	2	100.0
3-HYDROXYPHENYLACETATE-DEGRADATION-PWY	4-hydroxyphenylacetate degradation 4-HPA degradation Homoprotocatechuate degradation	2	8	25.0
ACETOACETATE-DEG-PWY	Acetoacetate degradation (to acetyl CoA)	1	2	50.0
ADENOSYLHOMOCYSCAT-PWY	L-methionine salvage from L-homocysteine	2	3	67.0
ALACAT2-PWY	L-alanine degradation II (to D-lactate)	2	3	67.0
ALADEG-PWY	L-alanine degradation I	1	2	50.0
ALANINE-DEG3-PWY	L-alanine degradation III	1	1	100.0
ALANINE-SYN2-PWY	L-alanine biosynthesis II	1	1	100.0
ALANINE-VALINESYN-PWY	L-alanine biosynthesis I	2	3	67.0
ANAGLYCOLYSIS-PWY	Glycolysis III (from glucose) Anaerobic glycolysis Embden-Meyerhof-Parnas pathway EMP pathway Glycolysis III (glucokinase)	10	10	100.0
ANAPHENOXI-PWY	L-phenylalanine degradation II (anaerobic) Anaerobic L-phenylalanine oxidation	2	3	67.0
ARABCAT-PWY	L-arabinose degradation I L-arabinose catabolism	1	3	33.0
ARG-GLU-PWY	L-arginine degradation VII (arginase 3 pathway)	2	2	100.0
ARG-PRO-PWY	L-arginine degradation VI (arginase 2 pathway) L-proline biosynthesis from arginine	4	4	100.0
ARGASEDEG-PWY	L-arginine degradation I (arginase pathway) L-arginase degradative pathway L-glutamate biosynthesis	3	3	100.0
ARGDEG-IV-PWY	L-arginine degradation VIII (arginine oxidase pathway)	1	4	25.0
ARGDEG-V-PWY	L-arginine degradation X (arginine monooxygenase pathway)	3	3	100.0
ARGININE-SYN4-PWY	L-ornithine biosynthesis II	3	4	75.0
ARGSPECAT-PWY	Spermine biosynthesis	2	2	100.0
ARGSYN-PWY	L-arginine biosynthesis I (via L-ornithine)	5	6	83.0
ARGSYNBSUB-PWY	L-arginine biosynthesis II (acetyl cycle)	9	9	100.0
ASPARAGINE-BIOSYNTHESIS	L-asparagine biosynthesis I	1	1	100.0
ASPARAGINE-DEG1-PWY	L-asparagine degradation I	1	1	100.0
ASPARAGINE-DEG1-PWY-1	L-asparagine degradation III (mammalian)	2	3	67.0
ASPARAGINESYN-PWY	L-asparagine biosynthesis II	1	1	100.0
ASPARTATE-DEG1-PWY	L-aspartate degradation I	1	1	100.0
ASPARTATESYN-PWY	L-aspartate biosynthesis L-aspartate biosynthesis and degradation	1	1	100.0
ASPASN-PWY	Superpathway of L-aspartate and L-asparagine biosynthesis Interconversion of L-aspartate and L-asparagine	4	7	57.0
BETA-ALA-DEGRADATION-I-PWY	Β-alanine degradation I	1	2	50.0
BETSYN-PWY	Glycine betaine biosynthesis I (Gram-negative bacteria)	2	2	100.0
BGALACT-PWY	Lactose degradation III Lactose degradation 3	1	1	100.0
BSUBPOLYAMSYN-PWY	Spermidine biosynthesis I Arginine degradation to spermidine Spermidine biosynthesis	2	2	100.0
CALVIN-PWY	Calvin-Benson-Bassham cycle Photosynthetic dark reactions Photosynthetic CO2 fixation Reductive pentose phosphate pathway Calvin cycle Carbon fixation Calvin-Benson cycle	13	13	100.0
CATECHOL-ORTHO-CLEAVAGE-PWY	Catechol degradation to β-ketoadipate Catechol degradation, ortho-cleavage	1	4	25.0
CENTBENZCOA-PWY	Benzoyl-CoA degradation II (anaerobic) Central benzoyl-CoA pathway (anaerobic)	2	7	29.0
CENTFERM-PWY	Pyruvate fermentation to butanoate Central fermentation pathway Acetobutylicum fermentation Pyruvate fermentation to butyrate	3	7	43.0
CHLOROPHYLL-SYN	3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) Light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I	9	9	100.0
CHOLINE-BETAINE-ANA-PWY	Choline degradation I Choline betaine anabolism	2	2	100.0
CITRULBIO-PWY	L-citrulline biosynthesis	8	8	100.0
CITRULLINE-DEG-PWY	L-citrulline degradation	2	2	100.0
COA-PWY	Coenzyme A biosynthesis I CoA biosynthesis	4	4	100.0
COA-PWY-1	Coenzyme A biosynthesis II (mammalian) CoA biosynthesis	5	5	100.0
COBALSYN-PWY	Adenosylcobalamin salvage from cobinamide I Vitamin B12 biosynthesis	2	6	33.0
CODH-PWY	Reductive acetyl coenzyme A pathway I (homoacetogenic bacteria) Wood pathway Acetate synthesis Acetyl-CoA pathway Carbon monoxide dehydrogenase pathway Carbon fixation CO2 fixation Ljungdahl-Wood pathway Wood-Ljungdahl pathway Reductive acetyl CoA pathway	5	9	56.0
COLANSYN-PWY	Colanic acid building blocks biosynthesis	5	11	45.0
CRNFORCAT-PWY	Creatinine degradation I Creatinine catabolism	2	4	50.0
CYANCAT-PWY	Cyanate degradation Cyanate catabolism	3	3	100.0
CYCLOHEXANOL-OXIDATION-PWY	Cyclohexanol degradation	1	5	20.0
CYSTEINE-DEG-PWY	L-cysteine degradation I Cysteine degradation I	2	3	67.0
... further results

@@ Line 1: / Line 1: @@
-{{#ask: [[Category:Reaction]] [[reconstruction source::in-silico_annotation]]
+{{#ask: [[Category:Pathway]]
-| ?COMMON NAME
+| ?common name
-| ?ec number
+| ?reaction found
-| ?reconstruction category
+| ?total reaction
-| ?reconstruction tool
+| ?completion rate
-| ?reconstruction source
-| ?gene associated
-| ?in pathway
 }}

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