Difference between revisions of "CPD0-1108"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17877 RXN-17877] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1108 CPD0-1108] == * smiles: ** C(C1(C(O)C(O)C(O)O1))O * common name: ** β-D-ribofura...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17877 RXN-17877] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-1108 CPD0-1108] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C1(C(O)C(O)C(O)O1))O
 
* common name:
 
* common name:
−
** methionine_aminopeptidase
+
** β-D-ribofuranose
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
+
** InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N
 +
* molecular weight:
 +
** 150.131   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[WATER]][c] '''+''' 1 [[L-methionyl-L-threonyl-Protein]][c] '''=>''' 1 [[Protein-N-terminal-L-threonine]][c] '''+''' 1 [[MET]][c]
+
== Reaction(s) of unknown directionality ==
−
* With common name(s):
+
* [[RXN-14904]]
−
** 1 H2O[c] '''+''' 1 an N-terminal-L-methionyl-L-threonyl-[protein][c] '''=>''' 1 an N-terminal L-threonyl-[protein][c] '''+''' 1 L-methionine[c]
+
* [[RXN0-5305]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_5715]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4247]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
+
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* LIGAND-CPD:
−
{{#set: common name=methionine_aminopeptidase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C16639 C16639]
−
{{#set: ec number=EC-3.4.11.18}}
+
* CHEMSPIDER:
−
{{#set: gene associated=Tiso_gene_5715|Tiso_gene_4247}}
+
** [http://www.chemspider.com/Chemical-Structure.394477.html 394477]
−
{{#set: in pathway=PWY-7800}}
+
* CHEBI:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=47002 47002]
−
{{#set: reconstruction tool=pathwaytools}}
+
* PUBCHEM:
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=447347 447347]
 +
{{#set: smiles=C(C1(C(O)C(O)C(O)O1))O}}
 +
{{#set: common name=β-D-ribofuranose}}
 +
{{#set: inchi key=InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N}}
 +
{{#set: molecular weight=150.131    }}
 +
{{#set: reversible reaction associated=RXN-14904|RXN0-5305}}

Latest revision as of 19:04, 21 March 2018

Metabolite CPD0-1108

  • smiles:
    • C(C1(C(O)C(O)C(O)O1))O
  • common name:
    • β-D-ribofuranose
  • inchi key:
    • InChIKey=HMFHBZSHGGEWLO-TXICZTDVSA-N
  • molecular weight:
    • 150.131
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD0-1108&oldid=39268"