Difference between revisions of "1.2.1.13-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_15285 == * left end position: ** 5892 * transcription direction: ** POSITIVE * right end position: ** 8538 * centisome position: ** 62.8547...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.13-RXN 1.2.1.13-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glyceraldehyde-3-phos...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15285 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.13-RXN 1.2.1.13-RXN] ==
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* left end position:
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* direction:
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** 5892
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** glyceraldehyde-3-phosphate_dehydrogenase
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* right end position:
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* ec number:
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** 8538
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** [http://enzyme.expasy.org/EC/1.2.1.13 EC-1.2.1.13]
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* centisome position:
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** 62.854706   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN0-1281]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[DPG]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GAP]][c] '''+''' 1 [[NADP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H+[c] '''+''' 1 1,3-bisphospho-D-glycerate[c] '''+''' 1 NADPH[c] '''=>''' 1 phosphate[c] '''+''' 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 NADP+[c]
 +
 
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_6766]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6765]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_20000]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_10646]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5892}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10296 10296]
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{{#set: right end position=8538}}
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* LIGAND-RXN:
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{{#set: centisome position=62.854706    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01063 R01063]
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{{#set: reaction associated=RXN0-1281}}
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* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P09672 P09672]
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** [http://www.uniprot.org/uniprot/P09094 P09094]
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** [http://www.uniprot.org/uniprot/P12858 P12858]
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** [http://www.uniprot.org/uniprot/P12859 P12859]
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** [http://www.uniprot.org/uniprot/P12860 P12860]
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** [http://www.uniprot.org/uniprot/P09315 P09315]
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** [http://www.uniprot.org/uniprot/P25856 P25856]
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** [http://www.uniprot.org/uniprot/Q7M1R8 Q7M1R8]
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** [http://www.uniprot.org/uniprot/Q7M1R7 Q7M1R7]
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** [http://www.uniprot.org/uniprot/Q37174 Q37174]
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** [http://www.uniprot.org/uniprot/P30724 P30724]
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** [http://www.uniprot.org/uniprot/P80505 P80505]
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** [http://www.uniprot.org/uniprot/Q55245 Q55245]
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** [http://www.uniprot.org/uniprot/O22534 O22534]
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** [http://www.uniprot.org/uniprot/P50362 P50362]
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** [http://www.uniprot.org/uniprot/P19866 P19866]
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** [http://www.uniprot.org/uniprot/Q41019 Q41019]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glyceraldehyde-3-phosphate_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.13}}
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{{#set: gene associated=Tiso_gene_6766|Tiso_gene_6765|Tiso_gene_20000|Tiso_gene_10646}}
 +
{{#set: in pathway=CALVIN-PWY}}
 +
{{#set: reconstruction category=manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:04, 21 March 2018

Reaction 1.2.1.13-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glyceraldehyde-3-phosphate_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 1,3-bisphospho-D-glycerate[c] + 1 NADPH[c] => 1 phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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