Difference between revisions of "RXN-11245"

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(Created page with "Category:Gene == Gene Tiso_gene_8353 == * left end position: ** 4577 * transcription direction: ** NEGATIVE * right end position: ** 6959 * centisome position: ** 44.35937...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11245 RXN-11245] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_8353 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11245 RXN-11245] ==
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* left end position:
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* direction:
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** 4577
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
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* right end position:
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** 3-hydroxyacyl-_dehydrogenase
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** 6959
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** hydroxyacyl-coenzyme_a_mitochondrial
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* centisome position:
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* ec number:
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** 44.35937   
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** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[LYSOPHOSPHOLIPASE-RXN]]
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* With identifiers:
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** experimental_annotation
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** 1 [[CPD-12199]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-10600]][c] '''+''' 1 [[PROTON]][c]
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***automated-name-match
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* With common name(s):
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* [[RXN-15035]]
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** 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 4-hydroxybenzoyl-acetyl-CoA[c] '''+''' 1 H+[c]
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** experimental_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7409]]
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* Gene: [[Tiso_gene_18838]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14262]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5857]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14026]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14027]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_18839]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-6435]], 4-hydroxybenzoate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6435 PWY-6435]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=4577}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
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{{#set: right end position=6959}}
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{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
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{{#set: centisome position=44.35937    }}
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{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
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{{#set: reaction associated=LYSOPHOSPHOLIPASE-RXN|RXN-15035}}
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{{#set: ec number=EC-1.1.1.35}}
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{{#set: pathway associated=PWY-7409}}
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{{#set: gene associated=Tiso_gene_18838|Tiso_gene_14262|Tiso_gene_5857|Tiso_gene_14026|Tiso_gene_14027|Tiso_gene_18839}}
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{{#set: in pathway=PWY-6435}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:06, 21 March 2018

Reaction RXN-11245

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA[c] + 1 NAD+[c] => 1 NADH[c] + 1 4-hydroxybenzoyl-acetyl-CoA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6435, 4-hydroxybenzoate biosynthesis V: PWY-6435
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11245&oldid=39523"