Difference between revisions of "RXN-16540"

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(Created page with "Category:Gene == Gene Tiso_gene_11351 == * left end position: ** 6041 * transcription direction: ** POSITIVE * right end position: ** 7185 * centisome position: ** 76.8379...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_11351 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] ==
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* left end position:
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* direction:
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** 6041
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** acyl-coenzyme_a_oxidase
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* right end position:
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** ORF
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** 7185
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** acyl-_dehydrogenase
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* centisome position:
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** acyl-CoA_dehydrogenase
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** 76.83796   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8.9 EC-1.3.8.9]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.1.1.64-RXN]]
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* With identifiers:
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** experimental_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CPD0-2117]][c] '''+''' 1 [[ETF-Reduced]][c]
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***automated-name-match
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* With common name(s):
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* [[CARBOXYLESTERASE-RXN]]
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** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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** experimental_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** experimental_annotation
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* Gene: [[Tiso_gene_6475]]
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***automated-name-match
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-10711]]
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*** Assignment: EC-NUMBER
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** experimental_annotation
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* Gene: [[Tiso_gene_5991]]
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***automated-name-match
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-10767]]
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*** Assignment: EC-NUMBER
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** experimental_annotation
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* Gene: [[Tiso_gene_16631]]
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***automated-name-match
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-12252]]
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*** Assignment: EC-NUMBER
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** experimental_annotation
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* Gene: [[Tiso_gene_18566]]
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***automated-name-match
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-12575]]
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*** Assignment: EC-NUMBER
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** experimental_annotation
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* Gene: [[Tiso_gene_883]]
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***automated-name-match
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** Source: [[annotation-experimental_annotation]]
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* [[RXNQT-4366]]
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*** Assignment: EC-NUMBER
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** experimental_annotation
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* Gene: [[Tiso_gene_17967]]
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***automated-name-match
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** Source: [[annotation-in-silico_annotation]]
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== Pathways associated ==
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*** Assignment: EC-NUMBER
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* [[PWY-6857]]
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== Pathways  ==
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* [[PWY-6303]]
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* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
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** '''6''' reactions found over '''22''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6041}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: right end position=7185}}
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{{#set: common name=ORF}}
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{{#set: centisome position=76.83796    }}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: pathway associated=PWY-6857|PWY-6303}}
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{{#set: ec number=EC-1.3.8.9}}
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{{#set: gene associated=Tiso_gene_6475|Tiso_gene_5991|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_883|Tiso_gene_17967}}
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{{#set: in pathway=PWY-7654|PWY-7656}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:07, 21 March 2018

Reaction RXN-16540

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
    • ORF
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 an oxidized electron-transfer flavoprotein[c] + 1 palmitoyl-CoA[c] => 1 trans-hexadec-2-enoyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 6 reactions found over 11 reactions in the full pathway
  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 6 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16540&oldid=39652"