Difference between revisions of "Ribonucleosides"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-723 CPD-723] == * smiles: ** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANYLYLTRANSFERASE-RXN MRNA-GUANYLYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-723 CPD-723] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANYLYLTRANSFERASE-RXN MRNA-GUANYLYLTRANSFERASE-RXN] ==
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* smiles:
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* direction:
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** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VXBLCLVRWCLEOX-BFYSZXNBSA-N
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* common name:
 
* common name:
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** 6-deoxocastasterone
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** mrna_capping_enzyme_alpha
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* molecular weight:
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** snurportin-1
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** 450.701   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.7.50 EC-2.7.7.50]
 
* Synonym(s):
 
* Synonym(s):
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** deoxocastasterone
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-778]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[PROTON]][c] '''+''' 1 [[CPD-8630]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[G5-pppR-mRNAs]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 2 H+[c] '''+''' 1 a 5'-diphospho-purine-[mRNA][c] '''+''' 1 GTP[c] '''=>''' 1 a 5'-(5'-triphosphoguanosine)-purine-[mRNA][c] '''+''' 1 diphosphate[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7172]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7173]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2229]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7375]], mRNA capping I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMST01030127
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R03828 R03828]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=13870433 13870433]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P32094 P32094]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=20712 20712]
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** [http://www.uniprot.org/uniprot/P33057 P33057]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O60942 O60942]
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** [http://www.genome.jp/dbget-bin/www_bget?C15802 C15802]
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** [http://www.uniprot.org/uniprot/P04298 P04298]
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* HMDB : HMDB33984
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** [http://www.uniprot.org/uniprot/P04318 P04318]
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{{#set: smiles=CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))}}
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** [http://www.uniprot.org/uniprot/P25950 P25950]
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{{#set: inchi key=InChIKey=VXBLCLVRWCLEOX-BFYSZXNBSA-N}}
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** [http://www.uniprot.org/uniprot/P20979 P20979]
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{{#set: common name=6-deoxocastasterone}}
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** [http://www.uniprot.org/uniprot/P11079 P11079]
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{{#set: molecular weight=450.701    }}
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** [http://www.uniprot.org/uniprot/Q01159 Q01159]
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{{#set: common name=deoxocastasterone}}
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** [http://www.uniprot.org/uniprot/Q84424 Q84424]
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{{#set: consumed by=RXN-778}}
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** [http://www.uniprot.org/uniprot/Q98257 Q98257]
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** [http://www.uniprot.org/uniprot/Q98268 Q98268]
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** [http://www.uniprot.org/uniprot/P40997 P40997]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mrna_capping_enzyme_alpha}}
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{{#set: common name=snurportin-1}}
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{{#set: ec number=EC-2.7.7.50}}
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{{#set: gene associated=Tiso_gene_7172|Tiso_gene_7173|Tiso_gene_2229}}
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{{#set: in pathway=PWY-7375}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:34, 10 January 2018

Reaction MRNA-GUANYLYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mrna_capping_enzyme_alpha
    • snurportin-1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H+[c] + 1 a 5'-diphospho-purine-[mRNA][c] + 1 GTP[c] => 1 a 5'-(5'-triphosphoguanosine)-purine-[mRNA][c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7375, mRNA capping I: PWY-7375
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Ribonucleosides&oldid=9586"