Difference between revisions of "DOPAMINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7743 RXN-7743] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7743 RXN-7743] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/2.3.1.182 EC-2.3.1.182]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
* common name:
 +
** [2Fe-2S] iron-sulfur cluster biosynthesis
 
* Synonym(s):
 
* Synonym(s):
 +
** [Fe-S] cluster biosynthesis
 +
** [2Fe-2S] cluster biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''10''' reactions in the full pathway
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** 1 [[PYRUVATE]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-31]][c]
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* [[RXN-14381]]
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* With common name(s):
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** 0 associated gene:
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** 1 pyruvate[c] '''+''' 1 acetyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (R)-citramalate[c]
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** 2 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14384]]
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* [[Tiso_gene_11453]]
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** 3 associated gene(s):
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** [[pantograph]]-[[synechocystis]]
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*** [[Tiso_gene_11478]]
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== Pathways  ==
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*** [[Tiso_gene_14710]]
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* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
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*** [[Tiso_gene_4284]]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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** 3 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-experimental_annotation]]
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* [[orthology]]:
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** [[orthology-esiliculosus]]
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*** [[synechocystis]]
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* [[RXN-14385]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14710]]
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*** [[Tiso_gene_11478]]
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*** [[Tiso_gene_4284]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[RXN-14386]]
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** 3 associated gene(s):
 +
*** [[Tiso_gene_11478]]
 +
*** [[Tiso_gene_14710]]
 +
*** [[Tiso_gene_4284]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[RXN-14387]]
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** 1 associated gene(s):
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*** [[Tiso_gene_15502]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
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* [[RXN-14388]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
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* [[RXN-14389]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-14390]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-14391]]
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** 0 associated gene:
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
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* [[RXN-15881]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_11478]]
 +
*** [[Tiso_gene_14710]]
 +
*** [[Tiso_gene_4284]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19046 19046]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07399 R07399]
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{{#set: common name=[2Fe-2S] iron-sulfur cluster biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=[Fe-S] cluster biosynthesis|[2Fe-2S] cluster biosynthesis}}
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{{#set: ec number=EC-2.3.1.182}}
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{{#set: reaction found=10}}
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{{#set: gene associated=Tiso_gene_11453}}
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{{#set: total reaction=10}}
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{{#set: in pathway=PWY-5101}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=synechocystis}}
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Revision as of 17:56, 18 March 2018

Pathway PWY-7250

  • taxonomic range:
  • common name:
    • [2Fe-2S] iron-sulfur cluster biosynthesis
  • Synonym(s):
    • [Fe-S] cluster biosynthesis
    • [2Fe-2S] cluster biosynthesis

Reaction(s) found

10 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

"2Fe-2S] iron-sulfur cluster biosynthesis" cannot be used as a page name in this wiki.
  • "Fe-S] cluster biosynthesis" cannot be used as a page name in this wiki.
  • "2Fe-2S] cluster biosynthesis" cannot be used as a page name in this wiki.


Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DOPAMINE&oldid=20756"