Difference between revisions of "Tiso gene 6578"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] == * direction: ** LEFT-TO-RIGHT * common name: ** violaxanthin de-epoxidase **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_MG+2 ExchangeSeed_MG+2] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formu...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7985 RXN-7985] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_MG+2 ExchangeSeed_MG+2] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
−
* common name:
+
−
** violaxanthin de-epoxidase
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−
** violaxanthin_de-_chloroplast
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−
** violaxanthin_de-epoxidase
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* Synonym(s):
 
* Synonym(s):
−
** VDE
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ASCORBATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD1F-131]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
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** 1.0 [[MG+2]][C-BOUNDARY] '''<=>''' 1.0 [[MG+2]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-ascorbate[c] '''+''' 1 H+[c] '''+''' 1 antheraxanthin[c] '''=>''' 1 zeaxanthin[c] '''+''' 1 H2O[c] '''+''' 1 L-dehydro-ascorbate[c]
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** 1.0 Mg2+[C-BOUNDARY] '''<=>''' 1.0 Mg2+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_1275]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
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* [[Tiso_gene_16523]]
 
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** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
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* [[Tiso_gene_5666]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
−
** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[esiliculosus]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
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−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=REVERSIBLE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21800 21800]
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{{#set: in pathway=}}
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* LIGAND-RXN:
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{{#set: reconstruction category=manual}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07179 R07179]
+
{{#set: reconstruction source=manual-import_from_medium}}
−
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: common name=violaxanthin de-epoxidase}}
+
−
{{#set: common name=violaxanthin_de-_chloroplast}}
+
−
{{#set: common name=violaxanthin_de-epoxidase}}
+
−
{{#set: common name=VDE}}
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−
{{#set: gene associated=Tiso_gene_1275|Tiso_gene_16523|Tiso_gene_5666}}
+
−
{{#set: in pathway=PWY-5945}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 17:57, 18 March 2018

Reaction ExchangeSeed_MG+2

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Mg2+[C-BOUNDARY] <=> 1.0 Mg2+[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6578&oldid=20845"