Difference between revisions of "8-AMINO-7-OXONONANOATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROSPHINGANINE-REDUCTASE-RXN 3-DEHYDROSPHINGANINE-REDUCTASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** 3-ketodihydrosphingosine_reductase
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** folate transformations II
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.102 EC-1.1.1.102]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''11''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-13612]][c]
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* [[1.5.1.20-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H+[c] '''+''' 1 3-dehydrosphinganine[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 D-erythro-sphinganine[c]
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*** [[Tiso_gene_14582]]
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*** [[Tiso_gene_16954]]
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== Genes associated with this reaction  ==
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** 4 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_18518]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***AUTOMATED-NAME-MATCH
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[DIHYDROFOLATEREDUCT-RXN]]
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== Pathways  ==
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** 0 associated gene:
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* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
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** 1 reconstruction source(s) associated:
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** '''3''' reactions found over '''13''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
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* [[FORMATETHFLIG-RXN]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** 2 associated gene(s):
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* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
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*** [[Tiso_gene_432]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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*** [[Tiso_gene_7582]]
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== Reconstruction information  ==
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** 4 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]:
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*** [[manual-primary_network]]
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*** [[creinhardtii]]
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*** [[annotation-experimental_annotation]]
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* [[annotation]]:
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*** [[orthology-esiliculosus]]
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** [[pathwaytools]]:
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* [[GLYOHMETRANS-RXN]]
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*** [[in-silico_annotation]]
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** 4 associated gene(s):
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*** [[Tiso_gene_16153]]
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*** [[Tiso_gene_16154]]
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*** [[Tiso_gene_18652]]
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*** [[Tiso_gene_7776]]
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** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[HOMOCYSMETB12-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1602]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_432]]
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*** [[Tiso_gene_6004]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-6321]]
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** 1 associated gene(s):
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*** [[Tiso_gene_17287]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[THYMIDYLATESYN-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_18478]]
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*** [[Tiso_gene_7708]]
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** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=5-FORMYL-THF-CYCLO-LIGASE-RXN 5-FORMYL-THF-CYCLO-LIGASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GCVMULTI-RXN GCVMULTI-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22640 22640]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3841 PWY-3841]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02978 R02978]
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{{#set: common name=folate transformations II}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=9}}
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{{#set: common name=3-ketodihydrosphingosine_reductase}}
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{{#set: total reaction=11}}
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{{#set: ec number=EC-1.1.1.102}}
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{{#set: completion rate=82.0}}
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{{#set: gene associated=Tiso_gene_18518}}
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{{#set: in pathway=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
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{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=creinhardtii}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:59, 18 March 2018

Pathway PWY-3841

  • taxonomic range:
  • common name:
    • folate transformations II
  • Synonym(s):

Reaction(s) found

9 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links



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