Difference between revisions of "CPD-10587"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase_d...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ORF
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** glycine betaine degradation I
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** adenylate_kinase_domain-containing_protein_1
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** nucleoside_diphosphate_kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''7''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[CDP]][c] '''=>''' 1 [[CTP]][c] '''+''' 1 [[ADP]][c]
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* [[DIMETHYLGLYCINE-DEHYDROGENASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ATP[c] '''+''' 1 CDP[c] '''=>''' 1 CTP[c] '''+''' 1 ADP[c]
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*** [[Tiso_gene_2717]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GLYOHMETRANS-RXN]]
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* [[Tiso_gene_9290]]
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** 4 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_16153]]
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***EC-NUMBER
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*** [[Tiso_gene_16154]]
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* [[Tiso_gene_17272]]
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*** [[Tiso_gene_18652]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_7776]]
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***EC-NUMBER
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_18224]]
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*** [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_17271]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[RXN-15124]]
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***EC-NUMBER
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** 0 associated gene:
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* [[Tiso_gene_195]]
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** 2 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_16529]]
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* [[RXN-15127]]
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** IN-SILICO_ANNOTATION
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** 0 associated gene:
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***EC-NUMBER
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** 2 reconstruction source(s) associated:
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]-[[athaliana]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[synechocystis]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.5-RXN 2.1.1.5-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15125 RXN-15125]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=SARCOX-RXN SARCOX-RXN]
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* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00570 R00570]
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{{#set: common name=glycine betaine degradation I}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=4}}
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{{#set: common name=ORF}}
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{{#set: total reaction=7}}
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{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
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{{#set: completion rate=57.0}}
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{{#set: common name=nucleoside_diphosphate_kinase}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: gene associated=Tiso_gene_9290|Tiso_gene_17272|Tiso_gene_18224|Tiso_gene_17271|Tiso_gene_195|Tiso_gene_16529}}
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{{#set: in pathway=PWY-7205}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:01, 18 March 2018

Pathway PWY-3661

Reaction(s) found

4 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-10587&oldid=21270"