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| Line 1: |
Line 1: |
| − | [[Category:Gene]] | + | [[Category:Pathway]] |
| − | == Gene Tiso_gene_5857 == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II] == |
| − | * left end position: | + | * taxonomic range: |
| − | ** 56 | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| − | * transcription direction:
| + | * common name: |
| − | ** NEGATIVE | + | ** NAD salvage pathway III |
| − | * right end position:
| + | |
| − | ** 2702 | + | |
| − | * centisome position:
| + | |
| − | ** 0.43583158
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** nicotinamide adenine dinucleotide salvage |
| | | | |
| − | == Reactions associated == | + | == Reaction(s) found == |
| − | * [[3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN]]
| + | '''2''' reactions found over '''5''' reactions in the full pathway |
| − | ** [[pantograph]]-[[athaliana]]
| + | * [[RXN-5822]] |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | ** 8 associated gene(s): |
| − | * [[HACD5]]
| + | *** [[Tiso_gene_8159]] |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | *** [[Tiso_gene_15256]] |
| − | * [[HACD5m]]
| + | *** [[Tiso_gene_9372]] |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | *** [[Tiso_gene_3271]] |
| − | * [[HBCHL]]
| + | *** [[Tiso_gene_10738]] |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | *** [[Tiso_gene_17309]] |
| − | * [[HBCHLm]]
| + | *** [[Tiso_gene_5996]] |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | *** [[Tiso_gene_17310]] |
| − | * [[HBCO]]
| + | ** 1 reconstruction source(s) associated: |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | *** [[annotation-in-silico_annotation]] |
| − | * [[HMNOS]]
| + | * [[RXN-5841]] |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | ** 7 associated gene(s): |
| − | * [[METHYLACYLYLCOA-HYDROXY-RXN]]
| + | *** [[Tiso_gene_5911]] |
| − | ** [[pantograph]]-[[athaliana]]
| + | *** [[Tiso_gene_6988]] |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | *** [[Tiso_gene_13929]] |
| − | * [[OHACYL-COA-DEHYDROG-RXN]]
| + | *** [[Tiso_gene_14434]] |
| − | ** in-silico_annotation
| + | *** [[Tiso_gene_14246]] |
| − | ***ec-number
| + | *** [[Tiso_gene_6640]] |
| − | ** experimental_annotation
| + | *** [[Tiso_gene_14435]] |
| − | ***ec-number
| + | ** 2 reconstruction source(s) associated: |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | *** [[annotation-in-silico_annotation]] |
| − | * [[PEROXID-RXN]]
| + | *** [[orthology-esiliculosus]] |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | == Reaction(s) not found == |
| − | * [[RXN-10698]] | + | * [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN] |
| − | ** in-silico_annotation | + | * [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4106 PWY3O-4106] |
| − | ***ec-number | + | * [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4106 PWY3O-4106] |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-10702]] | + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-10703]] | + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-11245]] | + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-11662]] | + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | ** [[pantograph]]-[[creinhardtii]] | + | |
| − | ** [[pantograph]]-[[creinhardtii]] | + | |
| − | * [[RXN-11667]] | + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | * [[RXN-12490]] | + | |
| − | ** in-silico_annotation | + | |
| − | ***ec-number | + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[RXN-12507]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[RXN-12570]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[RXN-12705]] | + | |
| − | ** in-silico_annotation | + | |
| − | ***ec-number | + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-12750]] | + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-14240]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-14266]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-14271]] | + | |
| − | ** [[pantograph]]-[[athaliana]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | ** [[pantograph]]-[[creinhardtii]] | + | |
| − | ** [[pantograph]]-[[creinhardtii]] | + | |
| − | * [[RXN-14275]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-15288]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | * [[RXN-16133]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17777]]
| + | |
| − | ** in-silico_annotation | + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17781]] | + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17786]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17790]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17793]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17794]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17797]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-17798]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN-2425]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[RXN-6383]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[RXN-8635]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[RXN-905]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | * [[RXN0-2044]]
| + | |
| − | ** in-silico_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** experimental_annotation
| + | |
| − | ***ec-number
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[TIGLYLCOA-HYDROXY-RXN]]
| + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways associated == | + | |
| − | * [[PWY-6920]] | + | |
| − | * [[P162-PWY]]
| + | |
| − | * [[PWY-5177]]
| + | |
| − | * [[PWY-6583]] | + | |
| − | * [[VALDEG-PWY]]
| + | |
| − | * [[PWY-6883]]
| + | |
| − | * [[PWY-7656]] | + | |
| − | * [[PWY-5136]]
| + | |
| − | * [[PWY-7778]]
| + | |
| − | * [[PWY-7779]]
| + | |
| − | * [[PWY-7574]]
| + | |
| − | * [[PWY-7094]]
| + | |
| − | * [[PWY-7654]]
| + | |
| − | * [[P3-PWY]]
| + | |
| − | * [[PWY66-391]]
| + | |
| − | * [[PWY-5789]]
| + | |
| − | * [[PWY-5461]]
| + | |
| − | * [[FAO-PWY]]
| + | |
| − | * [[CENTFERM-PWY]]
| + | |
| − | * [[PWY-6945]]
| + | |
| − | * [[PWY0-321]]
| + | |
| − | * [[PWY-5743]]
| + | |
| − | * [[ILEUDEG-PWY]]
| + | |
| − | * [[PWY-5744]]
| + | |
| − | * [[PWY-7007]]
| + | |
| − | * [[PWY-6435]]
| + | |
| − | * [[PWY-7214]]
| + | |
| − | * [[PWY-7216]]
| + | |
| − | * [[PWY-1361]]
| + | |
| − | * [[PWY-5109]]
| + | |
| − | * [[PWY-7445]]
| + | |
| − | * [[PWY-6946]]
| + | |
| − | * [[PWY-81]]
| + | |
| − | * [[PWY-6944]]
| + | |
| − | * [[PWY-735]]
| + | |
| − | * [[PWY-7401]]
| + | |
| − | * [[PWY-6863]]
| + | |
| − | * [[PWY-3941]]
| + | |
| | == External links == | | == External links == |
| − | {{#set: left end position=56}} | + | * ECOCYC: |
| − | {{#set: transcription direction=NEGATIVE}} | + | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II] |
| − | {{#set: right end position=2702}} | + | {{#set: taxonomic range=TAX-2}} |
| − | {{#set: centisome position=0.43583158 }} | + | {{#set: common name=NAD salvage pathway III}} |
| − | {{#set: reaction associated=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN|HACD5|HACD5m|HBCHL|HBCHLm|HBCO|HMNOS|METHYLACYLYLCOA-HYDROXY-RXN|OHACYL-COA-DEHYDROG-RXN|PEROXID-RXN|RXN-10698|RXN-10702|RXN-10703|RXN-11245|RXN-11662|RXN-11667|RXN-12490|RXN-12507|RXN-12570|RXN-12705|RXN-12750|RXN-14240|RXN-14266|RXN-14271|RXN-14275|RXN-15288|RXN-16133|RXN-17777|RXN-17781|RXN-17786|RXN-17790|RXN-17793|RXN-17794|RXN-17797|RXN-17798|RXN-2425|RXN-6383|RXN-8635|RXN-905|RXN0-2044|TIGLYLCOA-HYDROXY-RXN}} | + | {{#set: common name=nicotinamide adenine dinucleotide salvage}} |
| − | {{#set: pathway associated=PWY-6920|P162-PWY|PWY-5177|PWY-6583|VALDEG-PWY|PWY-6883|PWY-7656|PWY-5136|PWY-7778|PWY-7779|PWY-7574|PWY-7094|PWY-7654|P3-PWY|PWY66-391|PWY-5789|PWY-5461|FAO-PWY|CENTFERM-PWY|PWY-6945|PWY0-321|PWY-5743|ILEUDEG-PWY|PWY-5744|PWY-7007|PWY-6435|PWY-7214|PWY-7216|PWY-1361|PWY-5109|PWY-7445|PWY-6946|PWY-81|PWY-6944|PWY-735|PWY-7401|PWY-6863|PWY-3941}} | + | {{#set: reaction found=2}} |
| | + | {{#set: total reaction=5}} |
| | + | {{#set: completion rate=40.0}} |
