Difference between revisions of "Cyclic-Phosphate-Terminated-RNAs"

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(Created page with "Category:Gene == Gene Tiso_gene_7896 == * left end position: ** 392 * transcription direction: ** NEGATIVE * right end position: ** 1801 * centisome position: ** 3.6577399...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSDECARB-RXN P-PANTOCYSDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_7896 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSDECARB-RXN P-PANTOCYSDECARB-RXN] ==
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* left end position:
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* direction:
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** 392
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** NEGATIVE
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** [http://enzyme.expasy.org/EC/4.1.1.36 EC-4.1.1.36]
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* right end position:
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** 1801
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* centisome position:
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** 3.6577399   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PANTETHEINE-P]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 H+[c] '''+''' 1 R-4'-phosphopantothenoyl-L-cysteine[c] '''=>''' 1 CO2[c] '''+''' 1 4'-phosphopantetheine[c]
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***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15171]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=392}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16793 16793]
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{{#set: right end position=1801}}
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* LIGAND-RXN:
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{{#set: centisome position=3.6577399    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03269 R03269]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.1.1.36}}
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{{#set: gene associated=Tiso_gene_15171}}
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{{#set: in pathway=COA-PWY-1|COA-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 18:02, 18 March 2018

Reaction P-PANTOCYSDECARB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • COA-PWY-1, coenzyme A biosynthesis II (mammalian): COA-PWY-1
    • 5 reactions found over 5 reactions in the full pathway
  • COA-PWY, coenzyme A biosynthesis I: COA-PWY
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Cyclic-Phosphate-Terminated-RNAs&oldid=21376"