Difference between revisions of "PWY-7269"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-634 CPD-634] == * smiles: ** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)C(O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-634 CPD-634] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] ==
−
* smiles:
+
* direction:
−
** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=VYUIKSFYFRVQLF-YLNAYWRASA-N
+
 
* common name:
 
* common name:
−
** castasterone
+
** ORF
−
* molecular weight:
+
** Pyruvate carboxylase
−
** 464.684   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.4.1.1 EC-6.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-779]]
+
** 1 [[HCO3]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ADP]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 hydrogencarbonate[c] '''+''' 1 pyruvate[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 oxaloacetate[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_15144]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_2812]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_15145]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
 +
** '''7''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5750]], itaconate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5750 PWY-5750]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=133534 133534]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=23051 23051]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
−
* LIGAND-CPD:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?C15794 C15794]
+
** [http://www.uniprot.org/uniprot/Q05920 Q05920]
−
{{#set: smiles=CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))}}
+
** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
−
{{#set: inchi key=InChIKey=VYUIKSFYFRVQLF-YLNAYWRASA-N}}
+
** [http://www.uniprot.org/uniprot/P95127 P95127]
−
{{#set: common name=castasterone}}
+
** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
−
{{#set: molecular weight=464.684    }}
+
** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
−
{{#set: produced by=RXN-779}}
+
** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
 +
** [http://www.uniprot.org/uniprot/P11498 P11498]
 +
** [http://www.uniprot.org/uniprot/P52873 P52873]
 +
** [http://www.uniprot.org/uniprot/P11154 P11154]
 +
** [http://www.uniprot.org/uniprot/P32327 P32327]
 +
** [http://www.uniprot.org/uniprot/O17732 O17732]
 +
** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
 +
** [http://www.uniprot.org/uniprot/Q16921 Q16921]
 +
** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=Pyruvate carboxylase}}
 +
{{#set: ec number=EC-6.4.1.1}}
 +
{{#set: gene associated=Tiso_gene_15144|Tiso_gene_2812|Tiso_gene_15145}}
 +
{{#set: in pathway=PWY-6142|PWY-6146|PWY-5750|P42-PWY|PWY66-399}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:02, 18 March 2018

Reaction PYRUVATE-CARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • Pyruvate carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogencarbonate[c] + 1 pyruvate[c] + 1 ATP[c] => 1 H+[c] + 1 phosphate[c] + 1 oxaloacetate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-6146, Methanobacterium thermoautotrophicum biosynthetic metabolism: PWY-6146
    • 7 reactions found over 16 reactions in the full pathway
  • PWY-5750, itaconate biosynthesis: PWY-5750
    • 3 reactions found over 4 reactions in the full pathway
  • P42-PWY, incomplete reductive TCA cycle: P42-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-7269&oldid=21422"