Difference between revisions of "SAM-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] == * direction: ** REVER...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=M5TRK M5TRK] == * direction: ** LEFT-TO-RIGHT * common name: ** S-methyl-5-thioribose kinase * Syno...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=M5TRK M5TRK] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ketopantoate_hydroxymethyltransferase
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** S-methyl-5-thioribose kinase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[2-DEHYDROPANTOATE]][c]
+
** 1.0 [[CPD-560]][c] '''+''' 1.0 [[ATP]][c] '''=>''' 1.0 [[ADP]][c] '''+''' 1.0 [[CPD-444]][c] '''+''' 1.0 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 H2O[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 2-dehydropantoate[c]
+
** 1.0 S-methyl-5-thio-D-ribose[c] '''+''' 1.0 ATP[c] '''=>''' 1.0 ADP[c] '''+''' 1.0 S-methyl-5-thio-&alpha;-D-ribose 1-phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14466]]
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* [[Tiso_gene_11893]]
−
** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[creinhardtii]]
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_14465]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11824 11824]
+
{{#set: common name=S-methyl-5-thioribose kinase}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_11893}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
+
{{#set: in pathway=}}
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
+
−
** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
+
−
** [http://www.uniprot.org/uniprot/P31057 P31057]
+
−
** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
+
−
** [http://www.uniprot.org/uniprot/P38122 P38122]
+
−
** [http://www.uniprot.org/uniprot/Q09672 Q09672]
+
−
** [http://www.uniprot.org/uniprot/P52997 P52997]
+
−
** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
+
−
** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
+
−
** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
+
−
** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
+
−
** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=ketopantoate_hydroxymethyltransferase}}
+
−
{{#set: ec number=EC-2.1.2.11}}
+
−
{{#set: gene associated=Tiso_gene_14466|Tiso_gene_14465}}
+
−
{{#set: in pathway=PANTO-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 18:03, 18 March 2018

Reaction M5TRK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • S-methyl-5-thioribose kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 S-methyl-5-thio-D-ribose[c] + 1.0 ATP[c] => 1.0 ADP[c] + 1.0 S-methyl-5-thio-α-D-ribose 1-phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=SAM-PWY&oldid=21508"