Difference between revisions of "RXN-10660"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11201 RXN-11201] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol 24C methyltransferas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11201 RXN-11201] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-241806]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3312 TAX-3312]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
 
* common name:
 
* common name:
−
** sterol 24C methyltransferase
+
** 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
 
* Synonym(s):
 
* Synonym(s):
 +
** light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''8''' reactions found over '''9''' reactions in the full pathway
−
** 1.0 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1.0 [[CPD-12159]][c] '''=>''' 1.0 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1.0 [[CPD-12160]][c]
+
* [[PROTOPORGENOXI-RXN]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1.0 S-adenosyl-L-methionine[c] '''+''' 1.0 26,27-dehydrozymosterol[c] '''=>''' 1.0 S-adenosyl-L-homocysteine[c] '''+''' 1.0 24-alkyl sterol 1[c]
+
*** [[Tiso_gene_11986]]
−
 
+
*** [[Tiso_gene_15401]]
−
== Genes associated with this reaction  ==
+
** 6 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-experimental_annotation]]
−
* [[Tiso_gene_13974]]
+
*** [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_8634]]
+
*** [[orthology-athaliana]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[orthology-synechocystis]]
−
* [[Tiso_gene_11071]]
+
*** [[manual-primary_network]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[RXN-5282]]
−
* [[Tiso_gene_10757]]
+
** 0 associated gene:
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 reconstruction source(s) associated:
−
* [[Tiso_gene_13588]]
+
*** [[manual-primary_network]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[RXN-5283]]
−
* [[Tiso_gene_8895]]
+
** 0 associated gene:
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 reconstruction source(s) associated:
−
* [[Tiso_gene_19883]]
+
*** [[manual-primary_network]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[RXN-5284]]
−
* [[Tiso_gene_3977]]
+
** 0 associated gene:
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 reconstruction source(s) associated:
−
* [[Tiso_gene_15903]]
+
*** [[manual-primary_network]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
−
* [[Tiso_gene_10659]]
+
** 1 associated gene(s):
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_19451]]
−
* [[Tiso_gene_14051]]
+
** 5 reconstruction source(s) associated:
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-experimental_annotation]]
−
== Pathways  ==
+
*** [[manual-primary_network]]
−
== Reconstruction information  ==
+
*** [[annotation-in-silico_annotation]]
−
* [[orthology]]:
+
*** [[orthology-synechocystis]]
−
** [[pantograph]]:
+
*** [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
* [[RXN0-1461]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_2247]]
 +
*** [[Tiso_gene_2246]]
 +
*** [[Tiso_gene_13364]]
 +
*** [[Tiso_gene_13365]]
 +
*** [[Tiso_gene_3671]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN1F-20]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_9870]]
 +
*** [[Tiso_gene_11960]]
 +
*** [[Tiso_gene_5993]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-esiliculosus]]
 +
* [[UROGENDECARBOX-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18743]]
 +
*** [[Tiso_gene_19684]]
 +
*** [[Tiso_gene_18744]]
 +
*** [[Tiso_gene_5173]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17485 RXN-17485]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* PLANTCYC : PWY-7159
−
{{#set: common name=sterol 24C methyltransferase}}
+
{{#set: taxonomic range=TAX-241806}}
−
{{#set: gene associated=Tiso_gene_13974|Tiso_gene_8634|Tiso_gene_11071|Tiso_gene_10757|Tiso_gene_13588|Tiso_gene_8895|Tiso_gene_19883|Tiso_gene_3977|Tiso_gene_15903|Tiso_gene_10659|Tiso_gene_14051}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: in pathway=}}
+
{{#set: taxonomic range=TAX-1117}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: taxonomic range=TAX-3041}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: taxonomic range=TAX-3312}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: taxonomic range=TAX-3208}}
 +
{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)}}
 +
{{#set: common name=light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis}}
 +
{{#set: reaction found=8}}
 +
{{#set: total reaction=9}}
 +
{{#set: completion rate=89.0}}

Revision as of 19:05, 18 March 2018

Pathway PWY-7159

  • taxonomic range:
  • common name:
    • 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
  • Synonym(s):
    • light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-7159






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10660&oldid=21868"