Difference between revisions of "RXN-10660"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11201 RXN-11201] == * direction: ** LEFT-TO-RIGHT * common name: ** sterol 24C methyltransferas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11201 RXN-11201] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-241806 TAX-241806]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3312 TAX-3312]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
 
* common name:
 
* common name:
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** sterol 24C methyltransferase
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** 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
 
* Synonym(s):
 
* Synonym(s):
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** light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''9''' reactions in the full pathway
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** 1.0 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1.0 [[CPD-12159]][c] '''=>''' 1.0 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1.0 [[CPD-12160]][c]
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* [[PROTOPORGENOXI-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1.0 S-adenosyl-L-methionine[c] '''+''' 1.0 26,27-dehydrozymosterol[c] '''=>''' 1.0 S-adenosyl-L-homocysteine[c] '''+''' 1.0 24-alkyl sterol 1[c]
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*** [[Tiso_gene_11986]]
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*** [[Tiso_gene_15401]]
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== Genes associated with this reaction  ==
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** 6 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_13974]]
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*** [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_8634]]
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*** [[orthology-athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-synechocystis]]
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* [[Tiso_gene_11071]]
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*** [[manual-primary_network]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-5282]]
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* [[Tiso_gene_10757]]
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** 0 associated gene:
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** [[pantograph]]-[[esiliculosus]]
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_13588]]
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*** [[manual-primary_network]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-5283]]
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* [[Tiso_gene_8895]]
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** 0 associated gene:
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** [[pantograph]]-[[esiliculosus]]
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_19883]]
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*** [[manual-primary_network]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-5284]]
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* [[Tiso_gene_3977]]
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** 0 associated gene:
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** [[pantograph]]-[[esiliculosus]]
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_15903]]
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*** [[manual-primary_network]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
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* [[Tiso_gene_10659]]
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** 1 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_19451]]
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* [[Tiso_gene_14051]]
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** 5 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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== Pathways  ==
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*** [[manual-primary_network]]
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* [[orthology]]:
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*** [[orthology-synechocystis]]
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** [[pantograph]]:
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*** [[orthology-esiliculosus]]
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*** [[esiliculosus]]
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* [[RXN0-1461]]
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** 5 associated gene(s):
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*** [[Tiso_gene_2247]]
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*** [[Tiso_gene_2246]]
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*** [[Tiso_gene_13364]]
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*** [[Tiso_gene_13365]]
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*** [[Tiso_gene_3671]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[RXN1F-20]]
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** 3 associated gene(s):
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*** [[Tiso_gene_9870]]
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*** [[Tiso_gene_11960]]
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*** [[Tiso_gene_5993]]
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** 5 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[orthology-esiliculosus]]
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* [[UROGENDECARBOX-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_18743]]
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*** [[Tiso_gene_19684]]
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*** [[Tiso_gene_18744]]
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*** [[Tiso_gene_5173]]
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** 6 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17485 RXN-17485]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PLANTCYC : PWY-7159
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{{#set: common name=sterol 24C methyltransferase}}
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{{#set: taxonomic range=TAX-241806}}
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{{#set: gene associated=Tiso_gene_13974|Tiso_gene_8634|Tiso_gene_11071|Tiso_gene_10757|Tiso_gene_13588|Tiso_gene_8895|Tiso_gene_19883|Tiso_gene_3977|Tiso_gene_15903|Tiso_gene_10659|Tiso_gene_14051}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=}}
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{{#set: taxonomic range=TAX-1117}}
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{{#set: reconstruction category=orthology}}
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{{#set: taxonomic range=TAX-3041}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: taxonomic range=TAX-3312}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: taxonomic range=TAX-3208}}
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{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)}}
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{{#set: common name=light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis}}
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{{#set: reaction found=8}}
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{{#set: total reaction=9}}
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{{#set: completion rate=89.0}}

Revision as of 18:05, 18 March 2018

Pathway PWY-7159

  • taxonomic range:
  • common name:
    • 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)
  • Synonym(s):
    • light-independent aerobic 3,8-divinyl-chlorophyllide a biosynthesis

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-7159






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