Difference between revisions of "RXN-17779"

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(Created page with "Category:Gene == Gene Tiso_gene_17207 == * left end position: ** 959 * transcription direction: ** POSITIVE * right end position: ** 2595 * centisome position: ** 24.89615...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17207 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
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* left end position:
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* direction:
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** 959
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** thiolase
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* right end position:
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** acetyl-_c-acetyltransferase
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** 2595
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** 3-ketoacyl-_thiolase
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* centisome position:
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* ec number:
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** 24.896158   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[5.1.1.16-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[CPD-15687]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15688]][c]
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* [[5.1.1.18-RXN]]
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* With common name(s):
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** [[pantograph]]-[[creinhardtii]]
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** 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-cis, 5-trans-dodecadienoyl-CoA[c]
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* [[RXN-15122]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** experimental_annotation
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* [[Tiso_gene_10116]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN0-2381]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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** EXPERIMENTAL_ANNOTATION
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* [[RXN0-2382]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3856]]
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* [[THREDEHYD-RXN]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_15327]]
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** experimental_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[TRYPSYN-RXN]]
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* [[Tiso_gene_17451]]
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** [[pantograph]]-[[esiliculosus]]
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[ILEUSYN-PWY]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-5437]]
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***EC-NUMBER
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* [[PWY-6196]]
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* [[Tiso_gene_3855]]
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* [[PWY66-428]]
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** IN-SILICO_ANNOTATION
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* [[PWY-5826]]
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***EC-NUMBER
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* [[TRPSYN-PWY]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-6455]]
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***EC-NUMBER
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* [[PWY-6949]]
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== Pathways ==
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* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=959}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=thiolase}}
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{{#set: right end position=2595}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: centisome position=24.896158    }}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: reaction associated=5.1.1.16-RXN|5.1.1.18-RXN|RXN-15122|RXN0-2381|RXN0-2382|THREDEHYD-RXN|TRYPSYN-RXN}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: pathway associated=ILEUSYN-PWY|PWY-5437|PWY-6196|PWY66-428|PWY-5826|TRPSYN-PWY|PWY-6455|PWY-6949}}
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{{#set: gene associated=Tiso_gene_10116|Tiso_gene_3856|Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_3855}}
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{{#set: in pathway=PWY-7340}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:06, 18 March 2018

Reaction RXN-14799

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 3-cis, 5-trans-dodecadienoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): PWY-7340
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17779&oldid=21909"