Difference between revisions of "Alpha-hydroxyphytoceramides"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
(Created page with "Category:Gene == Gene Tiso_gene_13030 == * left end position: ** 192 * transcription direction: ** POSITIVE * right end position: ** 2246 * centisome position: ** 2.924600...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
+
== Gene Tiso_gene_13030 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 192
−
* common name:
+
* transcription direction:
−
** thiolase
+
** POSITIVE
−
** acetyl-_c-acetyltransferase
+
* right end position:
−
** 3-ketoacyl-_thiolase
+
** 2246
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** 2.9246001   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN]]
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-15687]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15688]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 coenzyme A[c] '''+''' 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-cis, 5-trans-dodecadienoyl-CoA[c]
+
* [[RXN-17203]]
−
 
+
** in-silico_annotation
−
== Genes associated with this reaction  ==
+
***ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-18301]]
−
* [[Tiso_gene_3855]]
+
** in-silico_annotation
−
** IN-SILICO_ANNOTATION
+
***ec-number
−
***EC-NUMBER
+
* [[RXN-18303]]
−
** EXPERIMENTAL_ANNOTATION
+
** in-silico_annotation
−
***EC-NUMBER
+
***ec-number
−
* [[Tiso_gene_10116]]
+
== Pathways associated ==
−
** IN-SILICO_ANNOTATION
+
* [[PWY-7840]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
+
−
** '''3''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=192}}
−
{{#set: common name=thiolase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: right end position=2246}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: centisome position=2.9246001    }}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: reaction associated=GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN|RXN-17203|RXN-18301|RXN-18303}}
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_10116|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_15327}}
+
{{#set: pathway associated=PWY-7840}}
−
{{#set: in pathway=PWY-7340}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:06, 18 March 2018

Gene Tiso_gene_13030

  • left end position:
    • 192
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2246
  • centisome position:
    • 2.9246001
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Alpha-hydroxyphytoceramides&oldid=21914"