Difference between revisions of "Alpha-hydroxyphytoceramides"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
(Created page with "Category:Gene == Gene Tiso_gene_13030 == * left end position: ** 192 * transcription direction: ** POSITIVE * right end position: ** 2246 * centisome position: ** 2.924600...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14799 RXN-14799] ==
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== Gene Tiso_gene_13030 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 192
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* common name:
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* transcription direction:
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** thiolase
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** POSITIVE
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** acetyl-_c-acetyltransferase
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* right end position:
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** 3-ketoacyl-_thiolase
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** 2246
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** 2.9246001   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-15687]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-15688]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 coenzyme A[c] '''+''' 1 5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 3-cis, 5-trans-dodecadienoyl-CoA[c]
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* [[RXN-17203]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-18301]]
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* [[Tiso_gene_3855]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-18303]]
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** EXPERIMENTAL_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_10116]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-7840]]
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7340 PWY-7340]
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** '''3''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=192}}
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{{#set: common name=thiolase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: right end position=2246}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: centisome position=2.9246001    }}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: reaction associated=GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN|RXN-17203|RXN-18301|RXN-18303}}
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{{#set: gene associated=Tiso_gene_3855|Tiso_gene_10116|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_15327}}
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{{#set: pathway associated=PWY-7840}}
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{{#set: in pathway=PWY-7340}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:06, 18 March 2018

Gene Tiso_gene_13030

  • left end position:
    • 192
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2246
  • centisome position:
    • 2.9246001
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Alpha-hydroxyphytoceramides&oldid=21914"