Difference between revisions of "XANTHOSINE-5-PHOSPHATE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE-5-PHOSPHATE XANTHOSINE-5-PHOSPHATE] == * smiles: ** C(OP(=O)([O-])[O-])C1(C(O)C(O)C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7659 RXN-7659] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=XANTHOSINE-5-PHOSPHATE XANTHOSINE-5-PHOSPHATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7659 RXN-7659] ==
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* smiles:
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* direction:
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** C(OP(=O)([O-])[O-])C1(C(O)C(O)C(O1)N3(C=NC2(C(=O)NC(=O)NC=23)))
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** REVERSIBLE
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* inchi key:
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** InChIKey=DCTLYFZHFGENCW-UUOKFMHZSA-L
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* common name:
 
* common name:
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** XMP
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** geranylgeranyl_diphosphate_reductase
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* molecular weight:
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** 362.192   
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* Synonym(s):
 
* Synonym(s):
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** (9-D-ribosylxanthine) 5'-phosphate
 
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** xanthosine 5-phosphate
 
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** xanthosine 5'-phosphate
 
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** xanthosine-5-P
 
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** xanthosine-5'-P
 
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** 9-(5-phospho-β-D-ribosyl)xanthine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[X5NT]]
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* With identifiers:
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* [[GMP-SYN-GLUT-RXN]]
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** 1 [[NADP]][c] '''+''' 1 [[CPD-7003]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[CPD-7002]][c] '''+''' 1 [[PROTON]][c]
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* [[XMPXAN-RXN]]
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* With common name(s):
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* [[GMP-SYN-NH3-RXN]]
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** 1 NADP+[c] '''+''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''<=>''' 1 NADPH[c] '''+''' 1 dihydrogeranylgeranyl diphosphate[c] '''+''' 1 H+[c]
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== Reaction(s) known to produce the compound ==
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* [[RXN0-1603]]
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== Genes associated with this reaction  ==
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* [[XANPRIBOSYLTRAN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[NTPD]]
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* [[Tiso_gene_2613]]
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== Reaction(s) of unknown directionality ==
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** IN-SILICO_ANNOTATION
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* [[IMP-DEHYDROG-RXN]]
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 523-98-8
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* LIGAND-RXN:
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* METABOLIGHTS : MTBLC57464
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** [http://www.genome.jp/dbget-bin/www_bget?R08755 R08755]
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* PUBCHEM:
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{{#set: direction=REVERSIBLE}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=23421208 23421208]
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{{#set: common name=geranylgeranyl_diphosphate_reductase}}
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* HMDB : HMDB01554
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{{#set: gene associated=Tiso_gene_2613}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-5063}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00655 C00655]
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{{#set: reconstruction category=annotation}}
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* CHEMSPIDER:
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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** [http://www.chemspider.com/Chemical-Structure.3859309.html 3859309]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57464 57464]
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* BIGG : xmp
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(C(O)C(O)C(O1)N3(C=NC2(C(=O)NC(=O)NC=23)))}}
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{{#set: inchi key=InChIKey=DCTLYFZHFGENCW-UUOKFMHZSA-L}}
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{{#set: common name=XMP}}
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{{#set: molecular weight=362.192    }}
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{{#set: common name=(9-D-ribosylxanthine) 5'-phosphate|xanthosine 5-phosphate|xanthosine 5'-phosphate|xanthosine-5-P|xanthosine-5'-P|9-(5-phospho-&beta;-D-ribosyl)xanthine}}
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{{#set: consumed by=X5NT|GMP-SYN-GLUT-RXN|XMPXAN-RXN|GMP-SYN-NH3-RXN}}
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{{#set: produced by=RXN0-1603|XANPRIBOSYLTRAN-RXN|NTPD}}
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{{#set: consumed or produced by=IMP-DEHYDROG-RXN}}
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Revision as of 18:06, 18 March 2018

Reaction RXN-7659

  • direction:
    • REVERSIBLE
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 tetrahydrogeranylgeranyl diphosphate[c] <=> 1 NADPH[c] + 1 dihydrogeranylgeranyl diphosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_2613
    • IN-SILICO_ANNOTATION
      • AUTOMATED-NAME-MATCH
    • EXPERIMENTAL_ANNOTATION
      • AUTOMATED-NAME-MATCH

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=XANTHOSINE-5-PHOSPHATE&oldid=22001"