Difference between revisions of "PWY-5175"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYL-PP GERANYL-PP] == * smiles: ** CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C * inchi key...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Metabolite]]
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[[Category:Pathway]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYL-PP GERANYL-PP] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7619 PWY-7619] ==
* smiles:
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* taxonomic range:
** CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
* inchi key:
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** InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K
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* common name:
 
* common name:
** geranyl diphosphate
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** juniperonate biosynthesis
* molecular weight:
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** 311.188   
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* Synonym(s):
 
* Synonym(s):
** geranyl-diphosphate
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** 5,11,14,17-icosatetraenoic acid biosynthesis
** geranyl-pyrophosphate
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** 5,11,14,17-icosatetraenoate biosynthesis
** GPP
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** juniperonic acid biosynthesis
** geranyl-PP
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** geranyl pyrophosphate
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** ω,E-geranyl diphosphate
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
* [[FPPSYN-RXN]]
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'''4''' reactions found over '''5''' reactions in the full pathway
* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
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* [[RXN-12994]]
== Reaction(s) known to produce the compound ==
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** 3 associated gene(s):
* [[GPPS]]
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*** [[Tiso_gene_9885]]
== Reaction(s) of unknown directionality ==
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*** [[Tiso_gene_13083]]
* [[GPPSYN-RXN]]
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*** [[Tiso_gene_9871]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-12997]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[RXN-13001]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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* [[RXN-13441]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11678 RXN-11678]
 
== External links  ==
 
== External links  ==
* METABOLIGHTS : MTBLC58057
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{{#set: taxonomic range=TAX-2759}}
* PUBCHEM:
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{{#set: common name=juniperonate biosynthesis}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=19379894 19379894]
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{{#set: common name=5,11,14,17-icosatetraenoic acid biosynthesis|5,11,14,17-icosatetraenoate biosynthesis|juniperonic acid biosynthesis}}
* KNAPSACK : C00000846
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{{#set: reaction found=4}}
* HMDB : HMDB01285
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{{#set: total reaction=5}}
* LIGAND-CPD:
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{{#set: completion rate=80.0}}
** [http://www.genome.jp/dbget-bin/www_bget?C00341 C00341]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.14211068.html 14211068]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58057 58057]
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* BIGG : grdp
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{{#set: smiles=CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C}}
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{{#set: inchi key=InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K}}
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{{#set: common name=geranyl diphosphate}}
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{{#set: molecular weight=311.188    }}
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{{#set: common name=geranyl-diphosphate|geranyl-pyrophosphate|GPP|geranyl-PP|geranyl pyrophosphate|ω,E-geranyl diphosphate}}
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{{#set: consumed by=FPPSYN-RXN|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN}}
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{{#set: produced by=GPPS}}
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{{#set: consumed or produced by=GPPSYN-RXN}}
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Revision as of 18:07, 18 March 2018

Pathway PWY-7619

  • taxonomic range:
  • common name:
    • juniperonate biosynthesis
  • Synonym(s):
    • 5,11,14,17-icosatetraenoic acid biosynthesis
    • 5,11,14,17-icosatetraenoate biosynthesis
    • juniperonic acid biosynthesis

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links