Difference between revisions of "PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-81 RXN66-81] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** fad-containing_monooxy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-81 RXN66-81] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADH-RXN NITRATE-REDUCTASE-NADH-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
 +
** assimilatory_nitrate_reductase
 
** ORF
 
** ORF
−
** fad-containing_monooxygenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.13.8 EC-1.14.13.8]
+
** [http://enzyme.expasy.org/EC/1.7.1.1 EC-1.7.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NICOTINE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-2743]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NITRITE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-nicotine[c] '''+''' 1 NADPH[c] '''+''' 1 oxygen[c] '''=>''' 1 nicotine-1'-N-oxide[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
+
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 nitrate[c] '''=>''' 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 nitrite[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9139]]
+
* [[Tiso_gene_16889]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_9613]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_10094]]
+
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_18918]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-201]], nicotine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-201 PWY66-201]
+
* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
−
** '''3''' reactions found over '''17''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17913 17913]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00794 R00794]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q39607 Q39607]
 +
** [http://www.uniprot.org/uniprot/Q41201 Q41201]
 +
** [http://www.uniprot.org/uniprot/P17569 P17569]
 +
** [http://www.uniprot.org/uniprot/P54233 P54233]
 +
** [http://www.uniprot.org/uniprot/P36841 P36841]
 +
** [http://www.uniprot.org/uniprot/P27967 P27967]
 +
** [http://www.uniprot.org/uniprot/P27969 P27969]
 +
** [http://www.uniprot.org/uniprot/P11035 P11035]
 +
** [http://www.uniprot.org/uniprot/P08509 P08509]
 +
** [http://www.uniprot.org/uniprot/P11605 P11605]
 +
** [http://www.uniprot.org/uniprot/P23312 P23312]
 +
** [http://www.uniprot.org/uniprot/P17570 P17570]
 +
** [http://www.uniprot.org/uniprot/P16081 P16081]
 +
** [http://www.uniprot.org/uniprot/Q01170 Q01170]
 +
** [http://www.uniprot.org/uniprot/P39865 P39865]
 +
** [http://www.uniprot.org/uniprot/P11832 P11832]
 +
** [http://www.uniprot.org/uniprot/P39869 P39869]
 +
** [http://www.uniprot.org/uniprot/Q43265 Q43265]
 +
** [http://www.uniprot.org/uniprot/P43101 P43101]
 +
** [http://www.uniprot.org/uniprot/P43100 P43100]
 +
** [http://www.uniprot.org/uniprot/Q42497 Q42497]
 +
** [http://www.uniprot.org/uniprot/P39866 P39866]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=assimilatory_nitrate_reductase}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=fad-containing_monooxygenase}}
+
{{#set: ec number=EC-1.7.1.1}}
−
{{#set: ec number=EC-1.14.13.8}}
+
{{#set: gene associated=Tiso_gene_16889|Tiso_gene_18918}}
−
{{#set: gene associated=Tiso_gene_9139|Tiso_gene_4|Tiso_gene_9613|Tiso_gene_10094}}
+
{{#set: in pathway=PWY-381}}
−
{{#set: in pathway=PWY66-201}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:08, 18 March 2018

Reaction NITRATE-REDUCTASE-NADH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • assimilatory_nitrate_reductase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADH[c] + 1 nitrate[c] => 1 NAD+[c] + 1 H2O[c] + 1 nitrite[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-381, nitrate reduction II (assimilatory): PWY-381
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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