Difference between revisions of "Tiso gene 9601"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5581 RXN-5581] == * direction: ** LEFT-TO-RIGHT * common name: ** aldehyde_dehydrogenase * ec n...")
(Created page with "Category:Gene == Gene Tiso_gene_19518 == * left end position: ** 935 * transcription direction: ** POSITIVE * right end position: ** 2250 * centisome position: ** 41.44503...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5581 RXN-5581] ==
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== Gene Tiso_gene_19518 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 935
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* common name:
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* transcription direction:
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** aldehyde_dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.2.1.5 EC-1.2.1.5]
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** 2250
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* centisome position:
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** 41.445034   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-5285]]
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** 1 [[INDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 2 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 indole acetaldehyde[c] '''+''' 1 NAD(P)+[c] '''+''' 1 H2O[c] '''=>''' 1 NAD(P)H[c] '''+''' 1 indole-3-acetate[c] '''+''' 2 H+[c]
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* [[RXN1F-10]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_7322]]
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* [[CHLOROPHYLL-SYN]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-3162]], L-tryptophan degradation V (side chain pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3162 PWY-3162]
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** '''2''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=935}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30867 30867]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2250}}
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{{#set: common name=aldehyde_dehydrogenase}}
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{{#set: centisome position=41.445034    }}
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{{#set: ec number=EC-1.2.1.5}}
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{{#set: reaction associated=RXN-5285|RXN1F-10}}
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{{#set: gene associated=Tiso_gene_7322}}
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{{#set: pathway associated=CHLOROPHYLL-SYN}}
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{{#set: in pathway=PWY-3162}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:09, 18 March 2018

Gene Tiso_gene_19518

  • left end position:
    • 935
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2250
  • centisome position:
    • 41.445034
  • Synonym(s):

Reactions associated

  • RXN-5285
    • in-silico_annotation
      • automated-name-match
  • RXN1F-10
    • in-silico_annotation
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9601&oldid=22276"