Difference between revisions of "R222-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15564 RXN-15564] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN] == * direction: ** LEFT-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15564 RXN-15564] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.2.2.16 EC-3.2.2.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N-terminal-Amino-Acids]][c] '''+''' 1 [[S-ubi-N-term-specific-UCP-E2-L-cysteine]][c] '''=>''' 1 [[N-terminal-ubiquitinyl-proteins]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[N-terminal-specific-UCP-E2-L-cysteine]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[5-METHYLTHIOADENOSINE]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-560]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N-terminal amino acyl-[protein][c] '''+''' 1 an S-ubiquitinyl-[an N-terminal E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''=>''' 1 an N-terminal-monoubiquitinyl-[protein][c] '''+''' 1 H+[c] '''+''' 1 an [N-terminal E2 ubiquitin-conjugating enzyme]-L-cysteine[c]
+
** 1 H2O[c] '''+''' 1 S-methyl-5'-thioadenosine[c] '''=>''' 1 adenine[c] '''+''' 1 S-methyl-5-thio-D-ribose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_12855]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
+
* [[PWY0-1391]], S-methyl-5'-thioadenosine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1391 PWY0-1391]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6754]], S-methyl-5'-thioadenosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6754 PWY-6754]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-creinhardtii]]
−
*** [[in-silico_annotation]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13617 13617]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01401 R01401]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=PWY-7511}}
+
{{#set: ec number=EC-3.2.2.16}}
−
{{#set: reconstruction category=annotation}}
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{{#set: gene associated=Tiso_gene_12855}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=PWY0-1391|PWY-6754}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:10, 18 March 2018

Reaction METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 S-methyl-5'-thioadenosine[c] => 1 adenine[c] + 1 S-methyl-5-thio-D-ribose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1391, S-methyl-5'-thioadenosine degradation IV: PWY0-1391
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6754, S-methyl-5'-thioadenosine degradation I: PWY-6754
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=R222-RXN&oldid=22470"