Difference between revisions of "HOMOSERSYN-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHYL-OH-METHOXY-BENZQ OCTAPRENYL-METHYL-OH-METHOXY-BENZQ] == * smiles: ** CC(C)=CC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] == * direction: ** REVERSIBL...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHYL-OH-METHOXY-BENZQ OCTAPRENYL-METHYL-OH-METHOXY-BENZQ] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BRANCHED-CHAINAMINOTRANSFERLEU-RXN BRANCHED-CHAINAMINOTRANSFERLEU-RXN] ==
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* smiles:
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* direction:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCC1(=C(C)C(O)=C(OC)C(O)=C(O)1)
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** REVERSIBLE
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* inchi key:
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** InChIKey=HOLCDWJWFMTVHO-WDXILIIOSA-N
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* common name:
 
* common name:
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** 3-demethylubiquinol-8
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** branched-chain_amino_acid_aminotransferase
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* molecular weight:
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* ec number:
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** 715.11   
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** [http://enzyme.expasy.org/EC/2.6.1.6 EC-2.6.1.6]
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** [http://enzyme.expasy.org/EC/2.6.1.42 EC-2.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
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** 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol
 
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** OMHMB
 
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** 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[DHHB-METHYLTRANSFER-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[LEU]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 L-leucine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 4-methyl-2-oxopentanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18403]]
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_14984]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7767]], leucine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7767 PWY-7767]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5076]], L-leucine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5076 PWY-5076]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657734 90657734]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18321 18321]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=61705 61705]
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** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
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* BIGG : 2omhmbl
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
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** [http://www.genome.jp/dbget-bin/www_bget?C05815 C05815]
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** [http://www.uniprot.org/uniprot/P38891 P38891]
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCC1(=C(C)C(O)=C(OC)C(O)=C(O)1)}}
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** [http://www.uniprot.org/uniprot/P47176 P47176]
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{{#set: inchi key=InChIKey=HOLCDWJWFMTVHO-WDXILIIOSA-N}}
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** [http://www.uniprot.org/uniprot/O86505 O86505]
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{{#set: common name=3-demethylubiquinol-8}}
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** [http://www.uniprot.org/uniprot/O14370 O14370]
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{{#set: molecular weight=715.11    }}
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** [http://www.uniprot.org/uniprot/O32954 O32954]
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{{#set: common name=2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol|OMHMB|2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone}}
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** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
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{{#set: consumed by=DHHB-METHYLTRANSFER-RXN}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=branched-chain_amino_acid_aminotransferase}}
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{{#set: ec number=EC-2.6.1.6}}
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{{#set: ec number=EC-2.6.1.42}}
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{{#set: gene associated=Tiso_gene_18403|Tiso_gene_14984}}
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{{#set: in pathway=PWY-7767|LEU-DEG2-PWY|PWY-5076|LEUSYN-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:11, 18 March 2018

Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • branched-chain_amino_acid_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-leucine[c] + 1 2-oxoglutarate[c] <=> 1 L-glutamate[c] + 1 4-methyl-2-oxopentanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7767, leucine degradation IV: PWY-7767
    • 1 reactions found over 5 reactions in the full pathway
  • LEU-DEG2-PWY, L-leucine degradation I: LEU-DEG2-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5076, L-leucine degradation III: PWY-5076
    • 2 reactions found over 3 reactions in the full pathway
  • LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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