Difference between revisions of "N-terminal-L-cysteine-sulfinate"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Tiso_gene_12058 == * left end position: ** 797 * transcription direction: ** POSITIVE * right end position: ** 5191 * centisome position: ** 10.86719...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE--TRNA-LIGASE-RXN ASPARAGINE--TRNA-LIGASE-RXN] ==
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== Gene Tiso_gene_12058 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 797
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* common name:
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* transcription direction:
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** mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)
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** POSITIVE
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** ORF
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* right end position:
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** mitochondrial_substrate_carrier_family_protein
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** 5191
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.1.1.22 EC-6.1.1.22]
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** 10.867194   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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** 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 L-asparagine[c] '''+''' 1 tRNAasn[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c]
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== Pathways associated ==
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* [[PWY-6386]]
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== Genes associated with this reaction  ==
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* [[PWY-6387]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9303]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9304]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13908]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6065]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9908]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=797}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11180 11180]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5191}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03648 R03648]
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{{#set: centisome position=10.867194    }}
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* UNIPROT:
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{{#set: reaction associated=UDPNACETYLMURAMATEDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/P39772 P39772]
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{{#set: pathway associated=PWY-6386|PWY-6387}}
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** [http://www.uniprot.org/uniprot/O57980 O57980]
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** [http://www.uniprot.org/uniprot/Q9V251 Q9V251]
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** [http://www.uniprot.org/uniprot/Q9CEK9 Q9CEK9]
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** [http://www.uniprot.org/uniprot/P47359 P47359]
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** [http://www.uniprot.org/uniprot/O51128 O51128]
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** [http://www.uniprot.org/uniprot/O83618 O83618]
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** [http://www.uniprot.org/uniprot/O58008 O58008]
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** [http://www.uniprot.org/uniprot/O96198 O96198]
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** [http://www.uniprot.org/uniprot/P54262 P54262]
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** [http://www.uniprot.org/uniprot/P75521 P75521]
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** [http://www.uniprot.org/uniprot/Q48966 Q48966]
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** [http://www.uniprot.org/uniprot/P0A8M0 P0A8M0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mitochondrial_carrier_(bou_s-adenosylmethionine_carrier)}}
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{{#set: common name=ORF}}
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{{#set: common name=mitochondrial_substrate_carrier_family_protein}}
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{{#set: ec number=EC-6.1.1.22}}
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{{#set: gene associated=Tiso_gene_9303|Tiso_gene_9304|Tiso_gene_13908|Tiso_gene_6065|Tiso_gene_9908}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:12, 18 March 2018

Gene Tiso_gene_12058

  • left end position:
    • 797
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5191
  • centisome position:
    • 10.867194
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=N-terminal-L-cysteine-sulfinate&oldid=22681"