Difference between revisions of "RXN-12459"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DNA-Cytosines DNA-Cytosines] == * common name: ** a cytosine in DNA * Synonym(s): ** a DNA dcyt...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] == * direction: ** REVERSIBLE * common name: **...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DNA-Cytosines DNA-Cytosines] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** a cytosine in DNA
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** ferrochelatase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.99.1.1 EC-4.99.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** a DNA dcytosine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.1.1.113-RXN]]
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* With identifiers:
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* [[DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN]]
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** 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[PROTOPORPHYRIN_IX]][c] '''+''' 1 [[FE+2]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ferroheme b[c] '''+''' 2 H+[c] '''<=>''' 1 protoporphyrin IX[c] '''+''' 1 Fe2+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3284]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_15900]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a cytosine in DNA}}
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* RHEA:
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{{#set: common name=a DNA dcytosine}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
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{{#set: consumed by=2.1.1.113-RXN|DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P22830 P22830]
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** [http://www.uniprot.org/uniprot/P22315 P22315]
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** [http://www.uniprot.org/uniprot/P28602 P28602]
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** [http://www.uniprot.org/uniprot/Q05338 Q05338]
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** [http://www.uniprot.org/uniprot/P42043 P42043]
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** [http://www.uniprot.org/uniprot/P23871 P23871]
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** [http://www.uniprot.org/uniprot/P32396 P32396]
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** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
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** [http://www.uniprot.org/uniprot/P56107 P56107]
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** [http://www.uniprot.org/uniprot/O67083 O67083]
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** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
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** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
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** [http://www.uniprot.org/uniprot/P22600 P22600]
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** [http://www.uniprot.org/uniprot/P43868 P43868]
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** [http://www.uniprot.org/uniprot/P16622 P16622]
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** [http://www.uniprot.org/uniprot/Q59735 Q59735]
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** [http://www.uniprot.org/uniprot/P43413 P43413]
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** [http://www.uniprot.org/uniprot/P54225 P54225]
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** [http://www.uniprot.org/uniprot/P42045 P42045]
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** [http://www.uniprot.org/uniprot/O64391 O64391]
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** [http://www.uniprot.org/uniprot/P42044 P42044]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=ferrochelatase}}
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{{#set: ec number=EC-4.99.1.1}}
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{{#set: gene associated=Tiso_gene_3284|Tiso_gene_15900}}
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{{#set: in pathway=PWY0-1415|HEMESYN2-PWY|HEME-BIOSYNTHESIS-II}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:13, 18 March 2018

Reaction PROTOHEMEFERROCHELAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ferrochelatase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12459&oldid=22804"