Difference between revisions of "PWY-6627"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methylcrotonyl-CoA:acetyl...")
(Created page with "Category:Gene == Gene Tiso_gene_13477 == * left end position: ** 2772 * transcription direction: ** NEGATIVE * right end position: ** 4803 * centisome position: ** 44.2387...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11921 RXN-11921] ==
+
== Gene Tiso_gene_13477 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2772
−
* common name:
+
* transcription direction:
−
** 3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
+
** 4803
 +
* centisome position:
 +
** 44.23875   
 
* Synonym(s):
 
* Synonym(s):
−
** 5-methyl-3-oxo-4-hexenoyl-CoA thiolase
 
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[ADENYL-KIN-RXN]]
−
** 1 [[CO-A]][c] '''+''' 1 [[CPD-12906]][c] '''=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** [[pantograph]]-[[esiliculosus]]
−
* With common name(s):
+
* [[GLUC1PURIDYLTRANS-RXN]]
−
** 1 coenzyme A[c] '''+''' 1 5-methyl-3-oxo-4-hexenoyl-CoA[c] '''=>''' 1 3-methylcrotonyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_16181]]
+
−
** [[pantograph]]-[[athaliana]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways ==
+
* [[PGCM]]
−
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
+
** [[pantograph]]-[[creinhardtii]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
* [[PGMTh]]
−
== Reconstruction information  ==
+
** [[pantograph]]-[[creinhardtii]]
−
* [[orthology]]:
+
* [[PHOSMANMUT-RXN]]
−
** [[pantograph]]:
+
** [[pantograph]]-[[synechocystis]]
−
*** [[esiliculosus]]
+
* [[PHOSPHOGLUCMUT-RXN]]
−
*** [[athaliana]]
+
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-14456]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[RXN-16997]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-16998]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
== Pathways associated ==
 +
* [[PWY-3801]]
 +
* [[PWY-7817]]
 +
* [[PWY-5659]]
 +
* [[PWY-2723]]
 +
* [[GLYCOGENSYNTH-PWY]]
 +
* [[PWY-5384]]
 +
* [[PWY-7343]]
 +
* [[PWY-7456]]
 +
* [[PWY-6527]]
 +
* [[PWY-5661]]
 +
* [[PWY-622]]
 +
* [[PWY-6317]]
 +
* [[PWY66-422]]
 +
* [[PWY-5941]]
 +
* [[PWY-5940]]
 +
* [[PWY-7238]]
 +
* [[PWY-882]]
 +
* [[GLYCOCAT-PWY]]
 +
* [[PWY-7219]]
 +
* [[PWY-7586]]
 +
* [[PWY-6731]]
 +
* [[GLUCOSE1PMETAB-PWY]]
 +
* [[PWY-6737]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=2772}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R08095 R08095]
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=4803}}
−
{{#set: common name=3-methylcrotonyl-CoA:acetyl-CoA C-acyltransferase}}
+
{{#set: centisome position=44.23875    }}
−
{{#set: ec number=EC-2.3.1}}
+
{{#set: reaction associated=ADENYL-KIN-RXN|GLUC1PURIDYLTRANS-RXN|PGCM|PGMTh|PHOSMANMUT-RXN|PHOSPHOGLUCMUT-RXN|RXN-14456|RXN-16997|RXN-16998}}
−
{{#set: common name=5-methyl-3-oxo-4-hexenoyl-CoA thiolase}}
+
{{#set: pathway associated=PWY-3801|PWY-7817|PWY-5659|PWY-2723|GLYCOGENSYNTH-PWY|PWY-5384|PWY-7343|PWY-7456|PWY-6527|PWY-5661|PWY-622|PWY-6317|PWY66-422|PWY-5941|PWY-5940|PWY-7238|PWY-882|GLYCOCAT-PWY|PWY-7219|PWY-7586|PWY-6731|GLUCOSE1PMETAB-PWY|PWY-6737}}
−
{{#set: gene associated=Tiso_gene_16181}}
+
−
{{#set: in pathway=PWY-6672}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+

Revision as of 18:14, 18 March 2018

Gene Tiso_gene_13477

  • left end position:
    • 2772
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4803
  • centisome position:
    • 44.23875
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6627&oldid=22929"