Difference between revisions of "N-terminal-Amino-Acids"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-4 RXN6666-4] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-4 RXN6666-4] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-389 PWY66-389] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/1.4.3.4 EC-1.4.3.4]
+
** phytol degradation
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''4''' reactions found over '''4''' reactions in the full pathway
** 1 [[DOPAMINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[34-DIHYDROXYPHENYLACETALDEHYDE]][c]
+
* [[RXN66-478]]
* With common name(s):
+
** 5 associated gene(s):
** 1 dopamine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 ammonium[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 3,4-dihydroxyphenylacetaldehyde[c]
+
*** [[Tiso_gene_6563]]
 
+
*** [[Tiso_gene_6562]]
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_5424]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_5425]]
* [[Tiso_gene_8756]]
+
*** [[Tiso_gene_7649]]
** [[pantograph]]-[[athaliana]]
+
** 1 reconstruction source(s) associated:
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
== Pathways  ==
+
* [[RXN66-479]]
* [[PWY-7431]], aromatic biogenic amine degradation (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7431 PWY-7431]
+
** 0 associated gene:
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** 1 reconstruction source(s) associated:
* [[PWY6666-2]], dopamine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY6666-2 PWY6666-2]
+
*** [[annotation-in-silico_annotation]]
** '''2''' reactions found over '''5''' reactions in the full pathway
+
* [[RXN66-480]]
== Reconstruction information  ==
+
** 9 associated gene(s):
* [[orthology]]:
+
*** [[Tiso_gene_10876]]
** [[pantograph]]:
+
*** [[Tiso_gene_348]]
*** [[athaliana]]
+
*** [[Tiso_gene_13394]]
*** [[esiliculosus]]
+
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_9394]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_4191]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_7855]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN66-482]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_10337]]
 +
*** [[Tiso_gene_18041]]
 +
*** [[Tiso_gene_18040]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-40674}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27946 27946]
+
{{#set: common name=phytol degradation}}
* LIGAND-RXN:
+
{{#set: reaction found=4}}
** [http://www.genome.jp/dbget-bin/www_bget?R04300 R04300]
+
{{#set: total reaction=4}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: completion rate=100.0}}
{{#set: ec number=EC-1.4.3.4}}
+
{{#set: gene associated=Tiso_gene_8756}}
+
{{#set: in pathway=PWY-7431|PWY6666-2}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=athaliana|esiliculosus}}
+

Revision as of 18:16, 18 March 2018

Pathway PWY66-389

  • taxonomic range:
  • common name:
    • phytol degradation
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links