Difference between revisions of "DAPLYSINESYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.41-RXN 2.3.1.41-RXN] == * direction: ** REVERSIBLE * common name: ** 3-oxoacyl-synthase * ec...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.41-RXN 2.3.1.41-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432] ==
* direction:
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* taxonomic range:
** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** 3-oxoacyl-synthase
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** L-phenylalanine biosynthesis III (cytosolic, plants)
* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[ACYL-ACP]][c] '''<=>''' 1 [[ACP]][c] '''+''' 1 [[B-KETOACYL-ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
* With common name(s):
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** 3 associated gene(s):
** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 an acyl-[acyl-carrier protein][c] '''<=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxoacyl-[acp][c] '''+''' 1 CO2[c]
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*** [[Tiso_gene_18977]]
 
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*** [[Tiso_gene_18976]]
== Genes associated with this reaction  ==
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*** [[Tiso_gene_18328]]
Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
* [[Tiso_gene_9885]]
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*** [[orthology-athaliana]]
** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
***AUTOMATED-NAME-MATCH
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*** [[orthology-synechocystis]]
* [[Tiso_gene_14485]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
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* [[PHEAMINOTRANS-RXN]]
* [[Tiso_gene_5939]]
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** 7 associated gene(s):
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_13892]]
***EC-NUMBER
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*** [[Tiso_gene_17809]]
** EXPERIMENTAL_ANNOTATION
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*** [[Tiso_gene_17718]]
***EC-NUMBER
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*** [[Tiso_gene_13538]]
* [[Tiso_gene_15991]]
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*** [[Tiso_gene_10680]]
** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_6815]]
* [[Tiso_gene_19302]]
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*** [[Tiso_gene_15680]]
** [[pantograph]]-[[esiliculosus]]
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** 4 reconstruction source(s) associated:
* [[Tiso_gene_13083]]
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*** [[orthology-athaliana]]
** EXPERIMENTAL_ANNOTATION
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*** [[orthology-creinhardtii]]
***AUTOMATED-NAME-MATCH
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*** [[orthology-synechocystis]]
== Pathways  ==
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*** [[orthology-esiliculosus]]
== Reconstruction information  ==
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* [[PREPHENATEDEHYDRAT-RXN]]
* [[orthology]]:
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** 2 associated gene(s):
** [[pantograph]]:
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*** [[Tiso_gene_6815]]
*** [[esiliculosus]]
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*** [[Tiso_gene_5940]]
* [[annotation]]:
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** 3 reconstruction source(s) associated:
** [[pathwaytools]]:
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*** [[manual-primary_network]]
*** [[experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
*** [[in-silico_annotation]]
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*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15200 RXN-15200]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.genome.jp/dbget-bin/www_bget?R02768 R02768]
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{{#set: common name=L-phenylalanine biosynthesis III (cytosolic, plants)}}
{{#set: direction=REVERSIBLE}}
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{{#set: reaction found=3}}
{{#set: common name=3-oxoacyl-synthase}}
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{{#set: total reaction=4}}
{{#set: ec number=EC-2.3.1.41}}
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{{#set: completion rate=75.0}}
{{#set: gene associated=Tiso_gene_9885|Tiso_gene_14485|Tiso_gene_5939|Tiso_gene_15991|Tiso_gene_19302|Tiso_gene_13083}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:17, 18 March 2018

Pathway PWY-7432

  • taxonomic range:
  • common name:
    • L-phenylalanine biosynthesis III (cytosolic, plants)
  • Synonym(s):

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links