Difference between revisions of "Tiso gene 8058"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CU+ CU+] == * smiles: ** [Cu+] * inchi key: ** InChIKey=VMQMZMRVKUZKQL-UHFFFAOYSA-N * common na...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12579 RXN-12579] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** zinc_finger_fyve_dom...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CU+ CU+] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12579 RXN-12579] ==
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* smiles:
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* direction:
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** [Cu+]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VMQMZMRVKUZKQL-UHFFFAOYSA-N
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* common name:
 
* common name:
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** Cu+
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** ORF
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* molecular weight:
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** zinc_finger_fyve_domain-containing_protein
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** 63.546   
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** triacylglycerol_lipase
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** class_3_lipase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.3 EC-3.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** Cu(I)
 
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** cuprous ion
 
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** cuprous copper
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[TransportSeed_CU+]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Dietary-retinyl-esters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-13524]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c]
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* [[TransportSeed_CU+]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a dietary all-trans-retinyl ester[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 all-trans-retinol[c] '''+''' 1 a long-chain fatty acid[c]
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* [[ExchangeSeed_CU+]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17613]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11437]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14063]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_905]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16817]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2109]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_14064]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19184]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17612]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2108]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2983]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17614]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8902]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_17639]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7915]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3215]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14062]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_906]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5716]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14109]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17143]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9140]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_288]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6857]], retinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6857 PWY-6857]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=104815 104815]
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{{#set: common name=ORF}}
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* CHEMSPIDER:
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{{#set: common name=zinc_finger_fyve_domain-containing_protein}}
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** [http://www.chemspider.com/Chemical-Structure.94614.html 94614]
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{{#set: common name=triacylglycerol_lipase}}
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* CHEBI:
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{{#set: common name=class_3_lipase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=49552 49552]
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{{#set: ec number=EC-3.1.1.3}}
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* BIGG : cu
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{{#set: gene associated=Tiso_gene_17613|Tiso_gene_11437|Tiso_gene_14063|Tiso_gene_905|Tiso_gene_16817|Tiso_gene_2109|Tiso_gene_14064|Tiso_gene_19184|Tiso_gene_17612|Tiso_gene_2108|Tiso_gene_2983|Tiso_gene_17614|Tiso_gene_8902|Tiso_gene_17639|Tiso_gene_7915|Tiso_gene_3215|Tiso_gene_14062|Tiso_gene_906|Tiso_gene_5716|Tiso_gene_14109|Tiso_gene_17143|Tiso_gene_9140|Tiso_gene_288}}
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{{#set: smiles=[Cu+]}}
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{{#set: in pathway=PWY-6857}}
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{{#set: inchi key=InChIKey=VMQMZMRVKUZKQL-UHFFFAOYSA-N}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=Cu+}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: molecular weight=63.546    }}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: common name=Cu(I)|cuprous ion|cuprous copper}}
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{{#set: reconstruction category=annotation}}
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{{#set: consumed by=TransportSeed_CU+}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: produced by=TransportSeed_CU+}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: consumed or produced by=ExchangeSeed_CU+}}
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Revision as of 16:52, 10 January 2018

Reaction RXN-12579

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • zinc_finger_fyve_domain-containing_protein
    • triacylglycerol_lipase
    • class_3_lipase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6857, retinol biosynthesis: PWY-6857
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8058&oldid=10743"