Difference between revisions of "3-oxo-D5-steroids"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_18204 == * left end position: ** 387 * transcription direction: ** NEGATIVE * right end position: ** 3120 * centisome position: ** 12.17747...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XXLG oligosaccha...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_18204 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] ==
−
* left end position:
+
* direction:
−
** 387
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** xyloglucan XXLG oligosaccharide β-galactosidase
−
* right end position:
+
** glycoside_hydrolase
−
** 3120
+
** polyprotein
−
* centisome position:
+
* ec number:
−
** 12.17747   
+
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RIBOKIN-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-13376]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
−
***automated-name-match
+
* With common name(s):
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 H2O[c] '''+''' 1 XXLG xyloglucan oligosaccharide[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
−
* [[RXN-14223]]
+
 
−
** in-silico_annotation
+
== Genes associated with this reaction  ==
−
***automated-name-match
+
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_17558]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12839]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_1398]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways associated ==
+
== Pathways ==
−
* [[RIBOKIN-PWY]]
+
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=387}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=NEGATIVE}}
+
{{#set: common name=xyloglucan XXLG oligosaccharide β-galactosidase}}
−
{{#set: right end position=3120}}
+
{{#set: common name=glycoside_hydrolase}}
−
{{#set: centisome position=12.17747    }}
+
{{#set: common name=polyprotein}}
−
{{#set: reaction associated=RIBOKIN-RXN|RXN-14223}}
+
{{#set: ec number=EC-3.2.1.23}}
−
{{#set: pathway associated=RIBOKIN-PWY}}
+
{{#set: gene associated=Tiso_gene_17558|Tiso_gene_12839|Tiso_gene_1398}}
 +
{{#set: in pathway=PWY-6807}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 15:34, 10 January 2018

Reaction RXN-12398

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xyloglucan XXLG oligosaccharide β-galactosidase
    • glycoside_hydrolase
    • polyprotein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 XXLG xyloglucan oligosaccharide[c] => 1 D-galactopyranose[c] + 1 XXXG xyloglucan oligosaccharide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-oxo-D5-steroids&oldid=9613"