Difference between revisions of "Tiso gene 10895"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PAPSPAPtm PAPSPAPtm] == * direction: ** REVERSIBLE * common name: ** PAPS:PAP antiporter, mitochond...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7741 RXN-7741] == * direction: ** LEFT-TO-RIGHT * common name: ** red_chlorophyll_catabolite_re...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PAPSPAPtm PAPSPAPtm] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7741 RXN-7741] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** PAPS:PAP antiporter, mitochondria
+
** red_chlorophyll_catabolite_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.7.12 EC-1.3.7.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3-5-ADP]][c] '''+''' 1.0 [[PAPS]][m] '''<=>''' 1.0 [[3-5-ADP]][m] '''+''' 1.0 [[PAPS]][c]
+
** 2 [[PROTON]][c] '''+''' 1 [[CPD-7063]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[CPD-7064]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 adenosine 3',5'-bisphosphate[c] '''+''' 1.0 3'-phosphoadenylyl-sulfate[m] '''<=>''' 1.0 adenosine 3',5'-bisphosphate[m] '''+''' 1.0 3'-phosphoadenylyl-sulfate[c]
+
** 2 H+[c] '''+''' 1 red chlorophyll catabolite[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 primary fluorescent chlorophyll catabolite[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5277]]
+
* [[Tiso_gene_17975]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5098]], chlorophyll a degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5098 PWY-5098]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6927]], chlorophyll a degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6927 PWY-6927]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=PAPS:PAP antiporter, mitochondria}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24755 24755]
−
{{#set: gene associated=Tiso_gene_5277}}
+
* LIGAND-RXN:
−
{{#set: in pathway=}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R09032 R09032]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=red_chlorophyll_catabolite_reductase}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: ec number=EC-1.3.7.12}}
 +
{{#set: gene associated=Tiso_gene_17975}}
 +
{{#set: in pathway=PWY-5098|PWY-6927}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:20, 18 March 2018

Reaction RXN-7741

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • red_chlorophyll_catabolite_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H+[c] + 1 red chlorophyll catabolite[c] + 2 a reduced ferredoxin [iron-sulfur] cluster[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 primary fluorescent chlorophyll catabolite[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5098, chlorophyll a degradation I: PWY-5098
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6927, chlorophyll a degradation II: PWY-6927
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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