Difference between revisions of "CPD-177"

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(Created page with "Category:Gene == Gene Tiso_gene_6765 == * left end position: ** 8741 * transcription direction: ** POSITIVE * right end position: ** 10607 * centisome position: ** 73.7201...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XYLULOKIN-RXN XYLULOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xylulose_kinase **...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6765 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XYLULOKIN-RXN XYLULOKIN-RXN] ==
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* left end position:
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* direction:
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** 8741
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** xylulose_kinase
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* right end position:
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** xylulokinase_homolog
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** 10607
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.7.1.17 EC-2.7.1.17]
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** 73.72016   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.2.1.13-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[D-XYLULOSE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[XYLULOSE-5-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 D-xylulose[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 D-xylulose 5-phosphate[c] '''+''' 1 H+[c]
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***ec-number
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* [[GAPDHSYNEC-RXN]]
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== Genes associated with this reaction  ==
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** experimental_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***automated-name-match
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* [[Tiso_gene_15822]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[CALVIN-PWY]]
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_15823]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14270]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[LARABITOLUTIL-PWY]], xylitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=LARABITOLUTIL-PWY LARABITOLUTIL-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[DARABITOLUTIL-PWY]], D-arabitol degradation: [http://metacyc.org/META/NEW-IMAGE?object=DARABITOLUTIL-PWY DARABITOLUTIL-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[XYLCAT-PWY]], xylose degradation I: [http://metacyc.org/META/NEW-IMAGE?object=XYLCAT-PWY XYLCAT-PWY]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=8741}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10964 10964]
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{{#set: right end position=10607}}
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* LIGAND-RXN:
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{{#set: centisome position=73.72016    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01639 R01639]
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{{#set: reaction associated=1.2.1.13-RXN|GAPDHSYNEC-RXN}}
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* UNIPROT:
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{{#set: pathway associated=CALVIN-PWY}}
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** [http://www.uniprot.org/uniprot/P27156 P27156]
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** [http://www.uniprot.org/uniprot/Q9CFG8 Q9CFG8]
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** [http://www.uniprot.org/uniprot/P35850 P35850]
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** [http://www.uniprot.org/uniprot/P09099 P09099]
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** [http://www.uniprot.org/uniprot/P12867 P12867]
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** [http://www.uniprot.org/uniprot/P27155 P27155]
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** [http://www.uniprot.org/uniprot/P21939 P21939]
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** [http://www.uniprot.org/uniprot/P29444 P29444]
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** [http://www.uniprot.org/uniprot/Q9X714 Q9X714]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=xylulose_kinase}}
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{{#set: common name=xylulokinase_homolog}}
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{{#set: ec number=EC-2.7.1.17}}
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{{#set: gene associated=Tiso_gene_15822|Tiso_gene_15823|Tiso_gene_14270}}
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{{#set: in pathway=LARABITOLUTIL-PWY|DARABITOLUTIL-PWY|XYLCAT-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:20, 18 March 2018

Reaction XYLULOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xylulose_kinase
    • xylulokinase_homolog
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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