Difference between revisions of "RXN-7664"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BISOHMYR-GLC BISOHMYR-GLC] == * smiles: ** CCCCCCCCCCCC(O)CC(=O)NC2(C(OCC1(OC(OP([O-])([O-])=O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BISOHMYR-GLC BISOHMYR-GLC] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] ==
−
* smiles:
+
* direction:
−
** CCCCCCCCCCCC(O)CC(=O)NC2(C(OCC1(OC(OP([O-])([O-])=O)C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(O)1))OC(CO)C(C2OC(CC(O)CCCCCCCCCCC)=O)O)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=HLDJGHAAKRKPAV-QDORLFPLSA-L
+
 
* common name:
 
* common name:
−
** lipid A disaccharide
+
** folic_acid_synthesis_protein
−
* molecular weight:
+
* ec number:
−
** 1323.726   
+
** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
 
* Synonym(s):
 
* Synonym(s):
−
** 2,3-bis-(3-hydroxytetradecanoyl)-β-D-glucosaminyl-(β-D-1,6)-2,3-bis-(3-hydroxytetradecanoyl)-α-D-glucosaminyl-1-phosphate
 
−
** 2,3-bis(3-hydroxymyristoyl)-β-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxymyristoyl)-α-D-glucosaminyl 1-phosphate
 
−
** 2'-3'-diacyl-GlcN(β-1'-6)2,3-diacyl-GlcN-1-P
 
−
** 2,3,2',3'-tetrakis(3-hydroxymyristoyl)-D-glucosaminyl-1,6-α-D-glucosamine 1-phosphate
 
−
** 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl 1-phosphate
 
−
** [2-N,3-O-bis(3-hydroxytetradecanoyl)-β-D-glucosaminyl]-(1 -> 6)-[2-N,3-O-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl phosphate]
 
−
** tetraacyldisaccharide-1-phosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[TETRAACYLDISACC4KIN-RXN]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[PROTON]][c]
−
* [[LIPIDADISACCHARIDESYNTH-RXN]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 6-(hydroxymethyl)-7,8-dihydropterin[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_11659]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244866 25244866]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11412 11412]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58466 58466]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
−
* BIGG : lipidAds
+
* UNIPROT:
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/P22291 P22291]
−
** [http://www.genome.jp/dbget-bin/www_bget?C04932 C04932]
+
** [http://www.uniprot.org/uniprot/P26281 P26281]
−
{{#set: smiles=CCCCCCCCCCCC(O)CC(=O)NC2(C(OCC1(OC(OP([O-])([O-])=O)C(NC(CC(O)CCCCCCCCCCC)=O)C(OC(CC(O)CCCCCCCCCCC)=O)C(O)1))OC(CO)C(C2OC(CC(O)CCCCCCCCCCC)=O)O)}}
+
** [http://www.uniprot.org/uniprot/O84619 O84619]
−
{{#set: inchi key=InChIKey=HLDJGHAAKRKPAV-QDORLFPLSA-L}}
+
** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
−
{{#set: common name=lipid A disaccharide}}
+
** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
−
{{#set: molecular weight=1323.726    }}
+
** [http://www.uniprot.org/uniprot/O66550 O66550]
−
{{#set: common name=2,3-bis-(3-hydroxytetradecanoyl)-β-D-glucosaminyl-(β-D-1,6)-2,3-bis-(3-hydroxytetradecanoyl)-α-D-glucosaminyl-1-phosphate|2,3-bis(3-hydroxymyristoyl)-β-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxymyristoyl)-α-D-glucosaminyl 1-phosphate|2'-3'-diacyl-GlcN(β-1'-6)2,3-diacyl-GlcN-1-P|2,3,2',3'-tetrakis(3-hydroxymyristoyl)-D-glucosaminyl-1,6-α-D-glucosamine 1-phosphate|2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6-β-D-2,3-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl 1-phosphate|[2-N,3-O-bis(3-hydroxytetradecanoyl)-β-D-glucosaminyl]-(1 -> 6)-[2-N,3-O-bis(3-hydroxytetradecanoyl)-α-D-glucosaminyl phosphate]|tetraacyldisaccharide-1-phosphate}}
+
** [http://www.uniprot.org/uniprot/O25680 O25680]
−
{{#set: consumed by=TETRAACYLDISACC4KIN-RXN}}
+
** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
−
{{#set: produced by=LIPIDADISACCHARIDESYNTH-RXN}}
+
** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
 +
** [http://www.uniprot.org/uniprot/P64143 P64143]
 +
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
 +
** [http://www.uniprot.org/uniprot/P82602 P82602]
 +
** [http://www.uniprot.org/uniprot/P29252 P29252]
 +
** [http://www.uniprot.org/uniprot/P72736 P72736]
 +
** [http://www.uniprot.org/uniprot/O04862 O04862]
 +
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
 +
** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=folic_acid_synthesis_protein}}
 +
{{#set: ec number=EC-2.7.6.3}}
 +
{{#set: gene associated=Tiso_gene_11659}}
 +
{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:20, 18 March 2018

Reaction H2PTERIDINEPYROPHOSPHOKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • folic_acid_synthesis_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7539, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): PWY-7539
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6797, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): PWY-6797
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: PWY-6147
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7664&oldid=23599"