Difference between revisions of "Tiso gene 19398"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_19398 == * left end position: ** 575 * transcription direction: ** POSITIVE * right end position: ** 2181 * centisome position: ** 24.43689...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DIOXYGENASE-RXN CYSTEINE-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DIOXYGENASE-RXN CYSTEINE-DIOXYGENASE-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** cysteine_dioxygenase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.13.11.20 EC-1.13.11.20] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | + | ** 1 [[CYS]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[3-SULFINOALANINE]][c] '''+''' 1 [[PROTON]][c] | |
| − | * | + | * With common name(s): |
| − | ** [[ | + | ** 1 L-cysteine[c] '''+''' 1 oxygen[c] '''=>''' 1 3-sulfinoalanine[c] '''+''' 1 H+[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[Tiso_gene_1457]] | ||
| + | ** IN-SILICO_ANNOTATION | ||
| + | ***AUTOMATED-NAME-MATCH | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
| − | == Pathways | + | ** [[pantograph]]-[[creinhardtii]] |
| − | * [[ | + | == Pathways == |
| − | * [[ | + | * [[PWY-5331]], taurine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5331 PWY-5331] |
| − | * [[ | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| + | * [[CYSTEINE-DEG-PWY]], L-cysteine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE-DEG-PWY CYSTEINE-DEG-PWY] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-creinhardtii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20441 20441] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00893 R00893] |
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P21816 P21816] |
| + | ** [http://www.uniprot.org/uniprot/Q16878 Q16878] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=cysteine_dioxygenase}} | ||
| + | {{#set: ec number=EC-1.13.11.20}} | ||
| + | {{#set: gene associated=Tiso_gene_1457}} | ||
| + | {{#set: in pathway=PWY-5331|CYSTEINE-DEG-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 18:22, 18 March 2018
Contents
Reaction CYSTEINE-DIOXYGENASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- cysteine_dioxygenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CYS[c] + 1 OXYGEN-MOLECULE[c] => 1 3-SULFINOALANINE[c] + 1 PROTON[c]
- With common name(s):
- 1 L-cysteine[c] + 1 oxygen[c] => 1 3-sulfinoalanine[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_1457
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- pantograph-esiliculosus
- pantograph-creinhardtii
- IN-SILICO_ANNOTATION
Pathways
- PWY-5331, taurine biosynthesis: PWY-5331
- 2 reactions found over 4 reactions in the full pathway
- CYSTEINE-DEG-PWY, L-cysteine degradation I: CYSTEINE-DEG-PWY
- 2 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-creinhardtii
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
