Difference between revisions of "PWY-6527"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5286 RXN-5286] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://enzyme.expasy.org/EC/1.3.1.75 EC-1.3.1.75]
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* common name:
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** NAD/NADH phosphorylation and dephosphorylation
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c]
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* [[NAD-KIN-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 3,8-divinyl chlorophyllide a[c] '''=>''' 1 NADP+[c] '''+''' 1 chlorophyllide a[c]
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*** [[Tiso_gene_14560]]
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*** [[Tiso_gene_1420]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_1163]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* [[Tiso_gene_13868]]
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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* [[NADH-DEHYDROG-A-RXN]]
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== Pathways  ==
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** 18 associated gene(s):
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* [[PWY-5526]], bacteriochlorophyll a biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5526 PWY-5526]
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*** [[Tiso_gene_10326]]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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*** [[Tiso_gene_18831]]
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* [[PWY-7758]], bacteriochlorophyll d biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7758 PWY-7758]
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*** [[Tiso_gene_4894]]
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** '''1''' reactions found over '''14''' reactions in the full pathway
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*** [[Tiso_gene_9874]]
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* [[PWY-7759]], bacteriochlorophyll c biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7759 PWY-7759]
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*** [[Tiso_gene_18172]]
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** '''1''' reactions found over '''18''' reactions in the full pathway
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*** [[Tiso_gene_18339]]
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* [[PWY-5064]], chlorophyll a biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064]
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*** [[Tiso_gene_19691]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[Tiso_gene_2949]]
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* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
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*** [[Tiso_gene_4836]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[Tiso_gene_17199]]
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* [[PWY-7760]], bacteriochlorophyll e biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7760 PWY-7760]
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*** [[Tiso_gene_5171]]
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** '''1''' reactions found over '''26''' reactions in the full pathway
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*** [[Tiso_gene_18707]]
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== Reconstruction information  ==
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*** [[Tiso_gene_359]]
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* [[orthology]]:
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*** [[Tiso_gene_3113]]
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** [[pantograph]]:
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*** [[Tiso_gene_13075]]
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*** [[creinhardtii]]
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*** [[Tiso_gene_355]]
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* [[manual]]:
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*** [[Tiso_gene_358]]
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** [[primary_network]]
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*** [[Tiso_gene_15276]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[manual-primary_network]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-5822]]
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** 8 associated gene(s):
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*** [[Tiso_gene_8159]]
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*** [[Tiso_gene_15256]]
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*** [[Tiso_gene_9372]]
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*** [[Tiso_gene_3271]]
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*** [[Tiso_gene_10738]]
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*** [[Tiso_gene_17309]]
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*** [[Tiso_gene_5996]]
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*** [[Tiso_gene_17310]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=NADH-KINASE-RXN NADH-KINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRNUTRANSHYDROGEN-RXN PYRNUTRANSHYDROGEN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7703 RXN-7703]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14449 14449]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5083 PWY-5083]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06272 R06272]
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{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=NAD/NADH phosphorylation and dephosphorylation}}
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{{#set: ec number=EC-1.3.1.75}}
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{{#set: reaction found=3}}
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{{#set: gene associated=Tiso_gene_13868}}
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{{#set: total reaction=6}}
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{{#set: in pathway=PWY-5526|PWY-7758|PWY-7759|PWY-5064|PWY-5086|PWY-7760}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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Revision as of 19:22, 18 March 2018

Pathway PWY-5083

  • taxonomic range:
  • common name:
    • NAD/NADH phosphorylation and dephosphorylation
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6527&oldid=23854"