Difference between revisions of "Tiso gene 18472"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13442 RXN-13442] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13442 RXN-13442] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** L-histidine biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''10''' reactions in the full pathway
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14018]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14423]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[ATPPHOSPHORIBOSYLTRANS-RXN]]
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* With common name(s):
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** 0 associated gene:
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** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 icosapentaenoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 CO2[c]
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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== Genes associated with this reaction  ==
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* [[GLUTAMIDOTRANS-RXN]]
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== Pathways  ==
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** 2 associated gene(s):
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* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
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*** [[Tiso_gene_1565]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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*** [[Tiso_gene_11199]]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** 4 reconstruction source(s) associated:
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** '''14''' reactions found over '''14''' reactions in the full pathway
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*** [[manual-primary_network]]
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* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
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*** [[orthology-creinhardtii]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-synechocystis]]
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== Reconstruction information  ==
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*** [[orthology-esiliculosus]]
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* [[annotation]]:
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* [[HISTALDEHYD-RXN]]
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** [[pathwaytools]]:
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** 2 associated gene(s):
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*** [[experimental_annotation]]
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*** [[Tiso_gene_11386]]
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*** [[in-silico_annotation]]
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*** [[Tiso_gene_7381]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[HISTAMINOTRANS-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_10680]]
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*** [[Tiso_gene_10679]]
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** 6 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[HISTCYCLOHYD-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_5047]]
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*** [[Tiso_gene_11297]]
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** 6 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[HISTIDPHOS-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14713]]
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** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
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*** [[annotation-experimental_annotation]]
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* [[HISTOLDEHYD-RXN]]
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** 2 associated gene(s):
 +
*** [[Tiso_gene_11386]]
 +
*** [[Tiso_gene_7381]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[HISTPRATPHYD-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_11297]]
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** 5 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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*** [[manual-primary_network]]
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* [[IMIDPHOSDEHYD-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-primary_network]]
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* [[PRIBFAICARPISOM-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_1565]]
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*** [[Tiso_gene_11199]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: ec number=EC-2.3.1}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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* ARACYC:
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{{#set: reconstruction category=annotation}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=L-histidine biosynthesis}}
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{{#set: reaction found=10}}
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{{#set: total reaction=10}}
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{{#set: completion rate=100.0}}

Revision as of 18:22, 18 March 2018

Pathway HISTSYN-PWY

Reaction(s) found

10 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links





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