Difference between revisions of "RXN-3422"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** caffeate_o-methyltransferase
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** L-threonine biosynthesis
* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''2''' reactions found over '''2''' reactions in the full pathway
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[5-HYDROXY-FERULIC-ACID]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[SINAPATE]][c]
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* [[HOMOSERKIN-RXN]]
* With common name(s):
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** 2 associated gene(s):
** 1 S-adenosyl-L-methionine[c] '''+''' 1 5-hydroxyferulate[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 sinapate[c]
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*** [[Tiso_gene_17705]]
 
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*** [[Tiso_gene_17704]]
== Genes associated with this reaction  ==
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** 7 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
* [[Tiso_gene_18257]]
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*** [[orthology-esiliculosus]]
** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
* [[Tiso_gene_18971]]
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*** [[orthology-athaliana]]
** IN-SILICO_ANNOTATION
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*** [[orthology-synechocystis]]
***AUTOMATED-NAME-MATCH
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*** [[manual-primary_network]]
== Pathways  ==
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*** [[orthology-creinhardtii]]
* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
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* [[THRESYN-RXN]]
** '''3''' reactions found over '''4''' reactions in the full pathway
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** 4 associated gene(s):
== Reconstruction information  ==
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*** [[Tiso_gene_12871]]
* [[orthology]]:
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*** [[Tiso_gene_418]]
** [[pantograph]]:
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*** [[Tiso_gene_2614]]
*** [[esiliculosus]]
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*** [[Tiso_gene_419]]
* [[annotation]]:
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** 7 reconstruction source(s) associated:
** [[pathwaytools]]:
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*** [[annotation-experimental_annotation]]
*** [[in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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* ECOCYC:
** [http://www.genome.jp/dbget-bin/www_bget?R02379 R02379]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
{{#set: common name=caffeate_o-methyltransferase}}
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{{#set: taxonomic range=TAX-4751}}
{{#set: ec number=EC-2.1.1.68}}
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{{#set: taxonomic range=TAX-2}}
{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
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{{#set: taxonomic range=TAX-33090}}
{{#set: in pathway=PWY-2181}}
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{{#set: common name=L-threonine biosynthesis}}
{{#set: reconstruction category=orthology}}
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{{#set: reaction found=2}}
{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=2}}
{{#set: reconstruction source=esiliculosus}}
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{{#set: completion rate=100.0}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:22, 18 March 2018

Pathway HOMOSER-THRESYN-PWY

Reaction(s) found

2 reactions found over 2 reactions in the full pathway

Reaction(s) not found

External links