Difference between revisions of "PWY66-420"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] == * direction: ** REVERSIBLE * common name: ** thymidine_phosphor...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYM-PHOSPH-RXN THYM-PHOSPH-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** thymidine_phosphorylase
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** fatty acid elongation -- saturated
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.2 EC-2.4.2.2]
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** [http://enzyme.expasy.org/EC/2.4.2.4 EC-2.4.2.4]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[Pi]][c] '''+''' 1 [[THYMIDINE]][c] '''<=>''' 1 [[THYMINE]][c] '''+''' 1 [[DEOXY-D-RIBOSE-1-PHOSPHATE]][c]
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* [[3-HYDROXYDECANOYL-ACP-DEHYDR-RXN]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 phosphate[c] '''+''' 1 thymidine[c] '''<=>''' 1 thymine[c] '''+''' 1 2-deoxy-&alpha;-D-ribose 1-phosphate[c]
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*** [[Tiso_gene_6884]]
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*** [[Tiso_gene_13394]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_500]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Tiso_gene_135]]
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* [[Tiso_gene_1011]]
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*** [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_10876]]
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***EC-NUMBER
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7181 PWY-7181]
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*** [[annotation-experimental_annotation]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[3-OXOACYL-ACP-REDUCT-RXN]]
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== Reconstruction information  ==
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** 7 associated gene(s):
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* [[annotation]]:
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*** [[Tiso_gene_13394]]
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** [[pathwaytools]]:
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*** [[Tiso_gene_500]]
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*** [[in-silico_annotation]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_13083]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_9885]]
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*** [[Tiso_gene_10876]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[3-OXOACYL-ACP-SYNTH-RXN]]
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** 9 associated gene(s):
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_19302]]
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*** [[Tiso_gene_5939]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_14485]]
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*** [[Tiso_gene_10876]]
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*** [[Tiso_gene_15991]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[ENOYL-ACP-REDUCT-NADH-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_10778]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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* [[ENOYL-ACP-REDUCT-NADPH-RXN]]
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** 5 associated gene(s):
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*** [[Tiso_gene_500]]
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*** [[Tiso_gene_136]]
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*** [[Tiso_gene_135]]
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*** [[Tiso_gene_13394]]
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*** [[Tiso_gene_10876]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16037 16037]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01570 R01570]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=fatty acid elongation -- saturated}}
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** [http://www.uniprot.org/uniprot/P47717 P47717]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/Q58081 Q58081]
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{{#set: total reaction=5}}
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** [http://www.uniprot.org/uniprot/P47297 P47297]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P19971 P19971]
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** [http://www.uniprot.org/uniprot/P19663 P19663]
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** [http://www.uniprot.org/uniprot/P07650 P07650]
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** [http://www.uniprot.org/uniprot/P75052 P75052]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=thymidine_phosphorylase}}
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{{#set: ec number=EC-2.4.2.2}}
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{{#set: ec number=EC-2.4.2.4}}
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{{#set: gene associated=Tiso_gene_1011}}
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{{#set: in pathway=PWY-7181}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:23, 18 March 2018

Pathway FASYN-ELONG-PWY

  • taxonomic range:
  • common name:
    • fatty acid elongation -- saturated
  • Synonym(s):

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY66-420&oldid=24002"