Difference between revisions of "Tiso gene 12995"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENETETRAHYDROMETHANOPTERIN METHYLENETETRAHYDROMETHANOPTERIN] == * smiles: ** CC4([CH]3(C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16483 RXN-16483] == * direction: ** LEFT-TO-RIGHT * common name: ** iduronate-2-sulfatase * ec...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYLENETETRAHYDROMETHANOPTERIN METHYLENETETRAHYDROMETHANOPTERIN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16483 RXN-16483] ==
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* smiles:
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* direction:
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** CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=GBMIGEWJAPFSQI-CAFBYHECSA-K
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* common name:
 
* common name:
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** 5,10-methylene-tetrahydromethanopterin
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** iduronate-2-sulfatase
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* molecular weight:
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* ec number:
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** 785.677   
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** [http://enzyme.expasy.org/EC/3.1.6.13 EC-3.1.6.13]
 
* Synonym(s):
 
* Synonym(s):
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** N5,N10-methylene-5,6,7,8-tetrahydromethanopterin
 
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** 5,10-methylene-5,6,7,8-tetrahydromethanopterin
 
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** methylene-H4MPT
 
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** 5,10-methylene-H4MPT
 
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** N5,N10-methylenetetrahydromethanopterin
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-15635]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-17701]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-17714]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate[c] '''+''' 1 H2O[c] '''=>''' 1 sulfate[c] '''+''' 1 H+[c] '''+''' 1 4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18595]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7644]], heparin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7644 PWY-7644]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46931094 46931094]
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{{#set: common name=iduronate-2-sulfatase}}
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* CHEBI:
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{{#set: ec number=EC-3.1.6.13}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57818 57818]
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{{#set: gene associated=Tiso_gene_18595}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-7644}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04377 C04377]
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{{#set: reconstruction category=annotation}}
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* HMDB : HMDB60401
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: smiles=CC4([CH]3(C(C)N(C2(C=CC(CC(O)C(O)C(O)COC1(C(O)C(C(COP([O-])(=O)OC(C(=O)[O-])CCC(=O)[O-])O1)O))=CC=2))CN3C5(C(=O)NC(N)=NC(N4)=5)))}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=GBMIGEWJAPFSQI-CAFBYHECSA-K}}
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{{#set: common name=5,10-methylene-tetrahydromethanopterin}}
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{{#set: molecular weight=785.677    }}
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{{#set: common name=N5,N10-methylene-5,6,7,8-tetrahydromethanopterin|5,10-methylene-5,6,7,8-tetrahydromethanopterin|methylene-H4MPT|5,10-methylene-H4MPT|N5,N10-methylenetetrahydromethanopterin}}
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{{#set: consumed by=RXN-15635}}
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Revision as of 18:27, 18 March 2018

Reaction RXN-16483

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • iduronate-2-sulfatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate[c] + 1 H2O[c] => 1 sulfate[c] + 1 H+[c] + 1 4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7644, heparin degradation: PWY-7644
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12995&oldid=24518"