Difference between revisions of "4-P-PANTOTHENATE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Apocytochromes-c Apocytochromes-c] == * common name: ** an apo-[c-type cytochrome] * Synonym(s)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-R...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Apocytochromes-c Apocytochromes-c] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** an apo-[c-type cytochrome]
+
** Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
 +
** propionyl-_carboxylase_alpha_chain
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.4.1.4 EC-6.4.1.4]
 
* Synonym(s):
 
* Synonym(s):
** an apocytochrome c
 
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
== Reaction(s) known to produce the compound ==
+
* With identifiers:
== Reaction(s) of unknown directionality ==
+
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c]
* [[HOLOCYTOCHROME-C-SYNTHASE-RXN]]
+
* With common name(s):
 +
** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 3-methylcrotonyl-CoA[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 3-methylglutaconyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_14499]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_5029]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_10675]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: common name=an apo-[c-type cytochrome]}}
+
* RHEA:
{{#set: common name=an apocytochrome c}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13589 13589]
{{#set: consumed or produced by=HOLOCYTOCHROME-C-SYNTHASE-RXN}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q40121 Q40121]
 +
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial}}
 +
{{#set: common name=propionyl-_carboxylase_alpha_chain}}
 +
{{#set: ec number=EC-6.4.1.4}}
 +
{{#set: gene associated=Tiso_gene_14499|Tiso_gene_5029|Tiso_gene_10675}}
 +
{{#set: in pathway=LEU-DEG2-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:28, 18 March 2018

Reaction METHYLCROTONYL-COA-CARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
    • propionyl-_carboxylase_alpha_chain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links