Difference between revisions of "4-P-PANTOTHENATE"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Apocytochromes-c Apocytochromes-c] == * common name: ** an apo-[c-type cytochrome] * Synonym(s)...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-R...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial |
+ | ** propionyl-_carboxylase_alpha_chain | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/6.4.1.4 EC-6.4.1.4] | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | == | + | * With identifiers: |
− | == | + | ** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[3-METHYL-CROTONYL-COA]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c] |
− | * [[ | + | * With common name(s): |
+ | ** 1 ATP[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 3-methylcrotonyl-CoA[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c] '''+''' 1 3-methylglutaconyl-CoA[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_14499]] | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | * [[Tiso_gene_5029]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** EXPERIMENTAL_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
+ | * [[Tiso_gene_10675]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***AUTOMATED-NAME-MATCH | ||
+ | == Pathways == | ||
+ | * [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-experimental_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: common name= | + | * RHEA: |
− | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13589 13589] |
− | {{#set: | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q40121 Q40121] | ||
+ | ** [http://www.uniprot.org/uniprot/Q42777 Q42777] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial}} | ||
+ | {{#set: common name=propionyl-_carboxylase_alpha_chain}} | ||
+ | {{#set: ec number=EC-6.4.1.4}} | ||
+ | {{#set: gene associated=Tiso_gene_14499|Tiso_gene_5029|Tiso_gene_10675}} | ||
+ | {{#set: in pathway=LEU-DEG2-PWY}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=orthology-creinhardtii|orthology-athaliana|annotation-in-silico_annotation|annotation-experimental_annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 18:28, 18 March 2018
Contents
Reaction METHYLCROTONYL-COA-CARBOXYLASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
- propionyl-_carboxylase_alpha_chain
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ATP[c] + 1 HCO3[c] + 1 3-METHYL-CROTONYL-COA[c] => 1 ADP[c] + 1 Pi[c] + 1 PROTON[c] + 1 TRANS-3-METHYL-GLUTACONYL-COA[c]
- With common name(s):
- 1 ATP[c] + 1 hydrogencarbonate[c] + 1 3-methylcrotonyl-CoA[c] => 1 ADP[c] + 1 phosphate[c] + 1 H+[c] + 1 3-methylglutaconyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_14499
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-creinhardtii
- EXPERIMENTAL_ANNOTATION
- Tiso_gene_5029
- IN-SILICO_ANNOTATION
- EC-NUMBER
- EXPERIMENTAL_ANNOTATION
- EC-NUMBER
- pantograph-creinhardtii
- IN-SILICO_ANNOTATION
- Tiso_gene_10675
- IN-SILICO_ANNOTATION
- AUTOMATED-NAME-MATCH
- IN-SILICO_ANNOTATION
Pathways
- LEU-DEG2-PWY, L-leucine degradation I: LEU-DEG2-PWY
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
External links