Difference between revisions of "PWY-6854"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14199 RXN-14199] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Gene == Gene Tiso_gene_406 == * left end position: ** 623 * transcription direction: ** POSITIVE * right end position: ** 4905 * centisome position: ** 1.8510265...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14199 RXN-14199] ==
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== Gene Tiso_gene_406 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 623
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* common name:
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* transcription direction:
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** ORF
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
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** 4905
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* centisome position:
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** 1.8510265   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[METHIONINE--TRNA-LIGASE-RXN]]
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** 1 [[DUTP]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[DUMP]][c] '''+''' 2 [[Pi]][c]
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** experimental_annotation
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* With common name(s):
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***ec-number
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** 1 dUTP[c] '''+''' 2 H2O[c] '''=>''' 2 H+[c] '''+''' 1 dUMP[c] '''+''' 2 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12899]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20236]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[RXN-16165]]
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== Reconstruction information  ==
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** experimental_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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== Pathways associated ==
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*** [[esiliculosus]]
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* [[TRNA-CHARGING-PWY]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=623}}
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{{#set: common name=ORF}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-3.6.1.5}}
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{{#set: right end position=4905}}
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{{#set: gene associated=Tiso_gene_12899|Tiso_gene_20236}}
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{{#set: centisome position=1.8510265    }}
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{{#set: in pathway=}}
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{{#set: reaction associated=METHIONINE--TRNA-LIGASE-RXN|RXN-16165}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:29, 18 March 2018

Gene Tiso_gene_406

  • left end position:
    • 623
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4905
  • centisome position:
    • 1.8510265
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6854&oldid=24761"