Difference between revisions of "PWY-6910"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** oxidoreductase ** ORF...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13671 RXN-13671] == * direction: ** REVERSIBLE * common name: ** ORF * ec number: ** [http://en...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13671 RXN-13671] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** oxidoreductase
 
 
** ORF
 
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
+
** [http://enzyme.expasy.org/EC/1.2.1.10 EC-1.2.1.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD0-2352]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2353]][c] '''+''' 1 [[tRNA-fragment]][c]
+
** 1 [[CPD-7000]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[ISOBUTYRYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tRNA precursor with a 5' extension and a short 3' extension[c] '''+''' 1 H2O[c] '''=>''' 1 a tRNA precursor with a short 3' extension[c] '''+''' 1 a tRNA fragment[c]
+
** 1 isobutanal[c] '''+''' 1 NAD+[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 isobutanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10971]]
+
* [[Tiso_gene_7649]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14345]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14344]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10972]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_3898]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
 
−
** '''4''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/Q02773 Q02773]
+
−
** [http://www.uniprot.org/uniprot/P41812 P41812]
+
−
** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
+
−
** [http://www.uniprot.org/uniprot/P48206 P48206]
+
−
** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
+
−
** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
+
−
** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
+
−
** [http://www.uniprot.org/uniprot/P29433 P29433]
+
−
** [http://www.uniprot.org/uniprot/P25817 P25817]
+
−
** [http://www.uniprot.org/uniprot/P22835 P22835]
+
−
** [http://www.uniprot.org/uniprot/P25814 P25814]
+
−
** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
+
−
** [http://www.uniprot.org/uniprot/Q55005 Q55005]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=oxidoreductase}}
+
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: ec number=EC-3.1.26.5}}
+
{{#set: ec number=EC-1.2.1.10}}
−
{{#set: gene associated=Tiso_gene_10971|Tiso_gene_14345|Tiso_gene_14344|Tiso_gene_10972|Tiso_gene_3898}}
+
{{#set: gene associated=Tiso_gene_7649}}
−
{{#set: in pathway=PWY0-1479}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Revision as of 18:29, 18 March 2018

Reaction RXN-13671

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 isobutanal[c] + 1 NAD+[c] + 1 coenzyme A[c] <=> 1 H+[c] + 1 NADH[c] + 1 isobutanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6910&oldid=24807"