Difference between revisions of "RXN-16076"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Gene == Gene Tiso_gene_8798 == * left end position: ** 4068 * transcription direction: ** NEGATIVE * right end position: ** 7301 * centisome position: ** 41.22416...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-742 RXN0-742] ==
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== Gene Tiso_gene_8798 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4068
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/6.3.4.18 EC-6.3.4.18]
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** NEGATIVE
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* right end position:
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** 7301
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* centisome position:
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** 41.22416   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[HISTIDINE--TRNA-LIGASE-RXN]]
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** 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''=>''' 1 [[CPD0-181]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 hydrogencarbonate[c] '''+''' 1 ATP[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''=>''' 1 N5-carboxyaminoimidazole ribonucleotide[c] '''+''' 1 phosphate[c] '''+''' 2 H+[c] '''+''' 1 ADP[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[TRNA-CHARGING-PWY]]
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* [[Tiso_gene_16011]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways ==
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4068}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19317 19317]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7301}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07404 R07404]
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{{#set: centisome position=41.22416    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=HISTIDINE--TRNA-LIGASE-RXN}}
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{{#set: ec number=EC-6.3.4.18}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: gene associated=Tiso_gene_16011}}
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{{#set: in pathway=PWY-6123|PWY-7234}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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Revision as of 18:30, 18 March 2018

Gene Tiso_gene_8798

  • left end position:
    • 4068
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7301
  • centisome position:
    • 41.22416
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16076&oldid=24946"